ggKbase home page

rifcsplowo2_12_scaffold_4315_11

Organism: RIFCSPLOWO2_12_FULL_Archaea_Woesearchaeota_38_19

near complete RP 37 / 55 MC: 8 BSCG 16 / 51 ASCG 36 / 38 MC: 1
Location: comp(5631..8351)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 907.0
  • Bit_score: 1361
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 856.0
  • Bit_score: 1283
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 849.0
  • Bit_score: 1142
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR11 → Archaea

Sequences

DNA sequence
Length: 2721
ATGGCAAAAGAGAAAGAAGCGGCAAAGGAAAAGGAAGTTGAAATGGAAGACCTGGAGCCAGAGGTAAAGGCAGCAGAAGAGGCTGAAGCAGTTGAAGCCTCAATTGAATCTGCGGAAACAGCAGAAGTTATCGCAGTCAAAAAGCCGGAAAGGATTGAAGCGGAGCAGCATATACACAAGCAGGTTAAAAGCATAGTCTTTTCTATACTATCCCCTAAAATGATAAAGGCGATGGCATCAGCCAAAATCGTCACGCCTGAGCTTTATGACAAGGAAGGCTATCCTGTTGATGGCGGCTTAATGGACATAAGGCTTGGCGTCATAGACCCTGGTTTAAGGTGCAAGACCTGCGGCTCAAAGCTGAAGGAATGCATAGGCCATTTTGGATATATTGAATTGGCAAGGCCCATCATACATGTAAAATTCGTGGCCATACTCCTTAACCTGCTGAAATGCACCTGCCGCGATTGCGGGCGCATCTTAATTTCGCAAAACAAAATCAAAAAAACCAAGGAGATTCTCGATGAGGTTGAAAAGGAAAAAGGCATTGAGGAGAGAAGGCAAAAAGTCAAGGATATTATAGCGAGCCTTAAAACAATAAACAAGTGCCCTAACTGCAAGGCAAGGCAGCATAAAATAAGCCTGGAAAAGCCCACAACCTTCATAGAGAATGAAAAAAGGATAAGCCCAATTGAAATCAGGACAAGGCTTGAGAAAATACCTGATGAGGATTGCGAGATTTTTGGACTGAAGCCGCCATACGTAAGGCCTGAATGGATGGTGCTCACTGTTTTGCCAATTCCTCCCGTGACAATGAGGCCCTCAATCACGCTTGAATCCGGAGAAAGGAGCGAGGATGACTTAACGCATAAGCTGGGAGATATTGTCAGGATAAACCAAAGGTTATTTGAAAATATAAATGCAGGCGCTCCTGAGATAATTGTTGAGGACTTATGGGACCTGCTCCAGTACCATATAACAACATTTTTTGACAACAGCATCGCGCAGTTGCCTCCTGCAAGGCATCGCTCCGGCCAGCCTTTGAAGACTATAAGTGAAAGGATAACAAGCAAAGAGGGCAGAATAAGGCATAATCTCGCCGGAAAAAGAACCAACTTCTCTGCAAGGACTGTCATAAGCCCCGATCCAATGATAGAGCTTAATGAGGTTGGAGTCCCTAAAGTGATTGCAATGACCCTTACAGTGCCGGAAAGGGTGAATGACTGGAATATTGCTTACCTGAAAAAATTTATCGAGCGCGGCCCGGAAATTTATCCTGGGGCGAATTACATAATAAGGCCGGACGGCAAAAAGAAGAAGATTACCGATGAAACCAAGGAGGCAAGCCTTGAGGAAATACAGCCGGGCTATATCGTTGAAAGGCATTTAATGGATGGCGACATAGCAGTTTTTAACAGGCAGCCTTCTTTGCACCGCATGTCCATGATGTGCCACCACATCAGAGTATTGCCGGGAAACACTTTAAGGCTGAATCCGGCTGTTTGCCACCCTTACAATGCGGACTTTGACGGGGATGAAATGAATTTGCATATCCCCCAGACAGAAGAGGCAAGGGCAGAAGCCGAAATTTTAATGGAAGTTCAAACCCAGCTTATATCCACAAGATACGGGCTAAGCATCATAGGCTGCGTGCAAGATGCCATATCAGGAAATTACCTGCTTACAAAAGAAATAGAGCTTTCAAGGCAGGAAGCCGTTGATTTACTGGCTTCCATAGGGCTTGAAGATTTTTCGAAATTGCCAAGAAAGGAAAAAATAAGCGGCAAGGAAGTCTTTTCAGCACTGATACCTGAGGATTTCACGTTCAAGGGAAAAACAAGGGCCAACGAAGATGTCCTGATAAAGGGCGGAAATCTGGTTGAAGGCTATATGGACAGCGCCAATTTAGGAGAAGGCTCCGGTTTATTATTAAGGAACCTGCACCAAAAATACGGCAAAAGCTTTACAATTGATTTGCTTGGAAAAATGTTCAGGCTGGGCATACAGGTTTTGCTGAGGAGAGGTTTTACATGCGTCATCTCGGATACTGATTTGCCGGAAAATGCCAGGATTGAAATACAAAACGTGCTTGAGAATGCAAAAAAAGATGTTGAAAGCCTGATACAGCTTTACAAGGACAATAAGCTCGATACTTTCCCGGGCAAGACTCTGGAGGAAACCCTTGAGCTTAGGATACTTGAAGTCTTGAATAAAGTGAGAAATAGGACAGGGGAAATAGTTGCGGAGAAAGCTGACAGGAAAACCCATACAATGATAATGGCAAATTCCGGGGCAAGAGGCAATCTGCTTAATCTTGCGCAGATGGCAGCCTGTGTCGGCCAGCAGGCAATGCGAGGCAAGAGGATAGGAAAAGGCTTTGCCGAAAGGACTTTATCCTCCTTTAAAAAACATGATTTCAGCCCGGAGGCAAGGGGCTTCATAAGCAATGGATTTAAAACCGGGCTGACGCCTTATGAGTTTTTCTTTGGCTCAATAACCGGAAGAGACAGCTTAATGGATACTGCATTGAGGACTCCCAAATCAGGCTACTTATACAGGAGGCTGGCGAATGCCATGCAGGATTTAAAAGTCGAATATGACCATACTGTAAGGGATGCAGGAGGAAGGATTATCCAGTTTGACTATGGTGAGGACGGGATAGATGTTTCAAAGTCAGAAGGAGGAATCATTAACACCAAAAGGGTTATTGATTTAATCTGA
PROTEIN sequence
Length: 907
MAKEKEAAKEKEVEMEDLEPEVKAAEEAEAVEASIESAETAEVIAVKKPERIEAEQHIHKQVKSIVFSILSPKMIKAMASAKIVTPELYDKEGYPVDGGLMDIRLGVIDPGLRCKTCGSKLKECIGHFGYIELARPIIHVKFVAILLNLLKCTCRDCGRILISQNKIKKTKEILDEVEKEKGIEERRQKVKDIIASLKTINKCPNCKARQHKISLEKPTTFIENEKRISPIEIRTRLEKIPDEDCEIFGLKPPYVRPEWMVLTVLPIPPVTMRPSITLESGERSEDDLTHKLGDIVRINQRLFENINAGAPEIIVEDLWDLLQYHITTFFDNSIAQLPPARHRSGQPLKTISERITSKEGRIRHNLAGKRTNFSARTVISPDPMIELNEVGVPKVIAMTLTVPERVNDWNIAYLKKFIERGPEIYPGANYIIRPDGKKKKITDETKEASLEEIQPGYIVERHLMDGDIAVFNRQPSLHRMSMMCHHIRVLPGNTLRLNPAVCHPYNADFDGDEMNLHIPQTEEARAEAEILMEVQTQLISTRYGLSIIGCVQDAISGNYLLTKEIELSRQEAVDLLASIGLEDFSKLPRKEKISGKEVFSALIPEDFTFKGKTRANEDVLIKGGNLVEGYMDSANLGEGSGLLLRNLHQKYGKSFTIDLLGKMFRLGIQVLLRRGFTCVISDTDLPENARIEIQNVLENAKKDVESLIQLYKDNKLDTFPGKTLEETLELRILEVLNKVRNRTGEIVAEKADRKTHTMIMANSGARGNLLNLAQMAACVGQQAMRGKRIGKGFAERTLSSFKKHDFSPEARGFISNGFKTGLTPYEFFFGSITGRDSLMDTALRTPKSGYLYRRLANAMQDLKVEYDHTVRDAGGRIIQFDYGEDGIDVSKSEGGIINTKRVIDLI*