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rifcsplowo2_12_scaffold_4315

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_4315_1
unknown

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1..198
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4315_2
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

408..989
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein
id=5103861 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_12_scaffold_4315_3

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976..1371
-----------------
DNA (396bp)
protein (132aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZ68_9EURY id=5103860 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF63138.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_12_scaffold_4315_4

Not on your lists

1615..2505
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW24896.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
rifcsplowo2_12_scaffold_4315_5

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2480..2671
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein
id=3230411 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW24897.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
rifcsplowo2_12_scaffold_4315_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(2697..3296)
-----------------
DNA (600bp)
protein (200aa)
30S ribosomal protein S7 Tax=AR11
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 id=5043965 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S7
rifcsplowo2_12_scaffold_4315_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(3298..3735)
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S12 Tax=AR11
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
rifcsplowo2_12_scaffold_4315_8

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comp(3782..4195)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_12_scaffold_4315_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4196..4483)
-----------------
DNA (288bp)
protein (96aa)
NEQ179 Tax=AR11
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
rifcsplowo2_12_scaffold_4315_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4486..5628)
-----------------
DNA (1143bp)
protein (381aa)
DNA-directed RNA polymerase subunit A'' Tax=AR11
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
DNA-directed RNA polymerase subunit A''
rifcsplowo2_12_scaffold_4315_11

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comp(5631..8351)
-----------------
DNA (2721bp)
protein (907aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
DNA-directed RNA polymerase
rifcsplowo2_12_scaffold_4315_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8356..10158)
-----------------
DNA (1803bp)
protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsplowo2_12_scaffold_4315_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10160..11647)
-----------------
DNA (1488bp)
protein (496aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsplowo2_12_scaffold_4315_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11640..11882)
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A
DNA-directed RNA polymerase subunit H Tax=AR11
DNA-directed RNA polymerase, subunit H
rifcsplowo2_12_scaffold_4315_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13582..14652)
-----------------
DNA (1071bp)
protein (357aa)
hypothetical protein Tax=AR11
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_4315_16
unknown

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comp(14678..14935)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4315_trna_1
unknown

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comp(15202..15326)
-----------------
DNA (125bp)
transferRNA
rifcsplowo2_12_scaffold_4315_17

Not on your lists

comp(15361..18006)
-----------------
DNA (2646bp)
protein (882aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371BE7E
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S21003 {ECO:0000313|EMBL:GAG22374.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_12_scaffold_4315_18
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(18061..19563)
-----------------
DNA (1503bp)
protein (501aa)
hypothetical protein id=18311231 bin=Haloredivivus tax=Haloredivivus rbh
Uncharacterized protein {ECO:0000313|EMBL:EHK02533.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
Small-conductance mechanosensitive channel
rifcsplowo2_12_scaffold_4315_19
unknown

Not on your lists

19687..19875
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4315_20
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(19877..20083)
-----------------
DNA (207bp)
protein (69aa)
Tax=CG_Woesearch_03
rifcsplowo2_12_scaffold_4315_21

Not on your lists

20407..22038
-----------------
DNA (1632bp)
protein (544aa)
Thermosome {ECO:0000313|EMBL:KHO53015.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
thermosome id=5043657 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thermosome, chaperonin Cpn60/TCP-1
rifcsplowo2_12_scaffold_4315_22

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comp(22063..22512)
-----------------
DNA (450bp)
protein (150aa)
Transcription regulator, Lrp/AsnC family id=5050205 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:KHO44986.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
AsnC family transcriptional regulator
rifcsplowo2_12_scaffold_4315_23
unknown

Not on your lists

22672..23244
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4315_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

23294..23695
-----------------
DNA (402bp)
protein (134aa)
FAD synthase Tax=AR11
FAD synthetase
cytidyltransferase-related domain protein; K14656 FAD synthetase id=5240942 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_12_scaffold_4315_25
unknown

Not on your lists

comp(23700..24404)
-----------------
DNA (705bp)
protein (235aa)
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD id=5103442 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD Tax=AR20
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifcsplowo2_12_scaffold_4315_26
unknown

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comp(24455..24910)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4315_27
unknown

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25091..25669
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4315_28
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

25714..26217
-----------------
DNA (504bp)
protein (168aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=NADM_THESM
rifcsplowo2_12_scaffold_4315_29
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(26207..26545)
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy