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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..405
DNA (405bp) protein (135aa)
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
gpsA; glycerol-3-phosphate dehydrogenase (NAD+ dependent); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=12555340 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

673..1596
DNA (924bp) protein (308aa)
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor id=12555339 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle-docking protein FtsY
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1723..2805
DNA (1083bp) protein (361aa)
ribD; riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] Tax=RIFCSPLOWO2_12_
riboflavin biosynthesis protein RibD id=12555338 bin=CNBR_ACIDO species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribD; riboflavin biosynthesis protein RibD
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2786..3415
DNA (630bp) protein (210aa)
ribE; Riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=12555337 bin=CNBR_ACIDO species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribE; riboflavin synthase subunit alpha
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3412..4674
DNA (1263bp) protein (421aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25 4.1.2.-); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFC
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=12555336 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3,4-dihydroxy-2-butanone 4-phosphate synthase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4674..5066
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5T8_9BACL
putative thiol-disulfide oxidoreductase DCC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thiol-disulfide oxidoreductase DCC
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


5424..6605
DNA (1182bp) protein (394aa)
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=12555334 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle subunit FFH/SRP54 (srp54)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


6727..7011
DNA (285bp) protein (95aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=12555333 bin=CNBR_ACIDO species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsP; 30S ribosomal protein S16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7008..7265
DNA (258bp) protein (86aa)
hypothetical protein; K06960 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K06960 id=12555332 bin=CNBR_ACIDO species=Clostridium sp. CAG:43 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7262..7795
DNA (534bp) protein (178aa)
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
16S rRNA-processing protein RimM id=12555331 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
16S rRNA-processing protein RimM
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7939..8733
DNA (795bp) protein (265aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=24448829 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
tRNA (guanine-N1)-methyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


8765..9124
DNA (360bp) protein (120aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=12555329 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9136..9759
DNA (624bp) protein (208aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=12555328 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease HII Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ribonuclease HII
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9763..11667
DNA (1905bp) protein (635aa)
Tetratricopeptide repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF9_CHLTF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11729..11941
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11938..12636
DNA (699bp) protein (233aa)
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] id=12555326 bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiamine monophosphate synthase (EC:2.5.1.3)
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12657..13451
DNA (795bp) protein (265aa)
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555325 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_14650_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13448..13543
DNA (96bp) protein (32aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 18 items

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