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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_6

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b

partial RP 42 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 3659..3865

Top 3 Functional Annotations

Value Algorithm Source
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 138
  • Evalue 4.90e-30
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 69.0
  • Bit_score: 119
  • Evalue 1.70e-24
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 63.0
  • Bit_score: 65
  • Evalue 8.10e-09

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGCCAAGCGGGACAATTGCACGGCTCCTGATCGACAAGGGCTTTGGATTCATCAGGGATGAGTCCGGCCTCGAGCACTTCTTTCATCGCAGCTCCGTTCGCGGCGCGGTGTTCGAGCTGCTGCGTGAAGGACAGCGCGTCGAGTTCACCATCGAGGAGTCCCAGAAGGGTCCTCGGGCTGGAGACGTGCGGCTCATTGAAGGGTAA
PROTEIN sequence
Length: 69
MPSGTIARLLIDKGFGFIRDESGLEHFFHRSSVRGAVFELLREGQRVEFTIEESQKGPRAGDVRLIEG*