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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030

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Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..327)
-----------------
DNA (327bp)
protein (109aa)
winged-helix transcriptional response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_cura
Two component transcriptional regulator, winged helix family id=1715191 bin=GWB2_Geobacter-like_52_12 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
winged-helix transcriptional response regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

560..1102
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein id=12556395 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1107..1682
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D0_OPITP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1679..2803
-----------------
DNA (1125bp)
protein (375aa)
Peptidase M10A and M12B matrixin and adamalysin n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZS6_OPITP
peptidase M10A and M12B matrixin and adamalysin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
peptidase M10A and M12B matrixin and adamalysin
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2813..3376)
-----------------
DNA (564bp)
protein (188aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BWB4_DESAD
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
metal dependent phosphohydrolase
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3659..3865
-----------------
DNA (207bp)
protein (69aa)
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3917..4546
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN31_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4704..5393)
-----------------
DNA (690bp)
protein (230aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I4_9BACT
hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hydrolase
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(5410..6117)
-----------------
DNA (708bp)
protein (236aa)
ABC transporter n=1 Tax=Deinococcus wulumuqiensis RepID=UPI00034CFF52
ribose import ATP-binding protein RbsA 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6114..6965)
-----------------
DNA (852bp)
protein (284aa)
metal-dependent phosphoesterase, PHP family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
phP-like protein id=12556561 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
metal-dependent phosphoesterase, PHP family
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6962..7990)
-----------------
DNA (1029bp)
protein (343aa)
Fe2+/Zn2+ uptake regulation protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Ferric uptake regulator, Fur family id=12556562 bin=CNBR_ACIDO species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fe2+/Zn2+ uptake regulation protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(7999..8373)
-----------------
DNA (375bp)
protein (125aa)
HesB protein family; K15724 iron-sulfur cluster insertion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein id=12556563 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative iron--sulfur cluster insertion protein ErpA
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8422..9957)
-----------------
DNA (1536bp)
protein (512aa)
fumarase (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
fumarase (EC:4.2.1.2)
Hydro-lyase id=4083919 bin=GWA2_Ignavibacteria_55_11 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10842..11303)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0Z7_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11955..14402
-----------------
DNA (2448bp)
protein (816aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021A2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14432..15082)
-----------------
DNA (651bp)
protein (217aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
type 11 methyltransferase id=12556565 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type 11 methyltransferase
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15088..15708)
-----------------
DNA (621bp)
protein (207aa)
BioY protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV2_9BACT
BioY protein; K03523 putative biotin biosynthesis protein BioY Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
BioY protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

15728..16516
-----------------
DNA (789bp)
protein (263aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Phosphomethylpyrimidine kinase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF58_THET1
phosphomethylpyrimidine kinase
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

16599..17072
-----------------
DNA (474bp)
protein (158aa)
molybdopterin converting factor-like protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
molybdopterin converting factor-like protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=12556567 bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdopterin converting factor-like protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17063..17308
-----------------
DNA (246bp)
protein (82aa)
molybdopterin synthase sulfur carrier subunit-like; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=12556568 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17417..18484
-----------------
DNA (1068bp)
protein (356aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=12556569 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prfA; peptide chain release factor 1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

18540..19385
-----------------
DNA (846bp)
protein (282aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Release factor glutamine methyltransferase n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z1E1_9RHOB
HemK family modification methylase
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

19412..19753
-----------------
DNA (342bp)
protein (114aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=12556571 bin=CNBR_ACIDO species=Thioalkalivibrio sp. ALJT genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidine triad (HIT) protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

19907..20899
-----------------
DNA (993bp)
protein (331aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FHW2_9RHIZ
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
DNA methylase N-4/N-6 domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_25
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20883..21491
-----------------
DNA (609bp)
protein (203aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21492..21884)
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21888..22721)
-----------------
DNA (834bp)
protein (278aa)
Chorismate synthase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_28
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(22778..23509)
-----------------
DNA (732bp)
protein (244aa)
haloacid dehalogenase domain-containing protein hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
HDHD3; haloacid dehalogenase-like hydrolase domain-containing protein 3 isoform 1 id=12556572 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
haloacid dehalogenase domain-containing protein hydrolase
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(23506..24912)
-----------------
DNA (1407bp)
protein (469aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Peptidase M16 family protein id=1891920 bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
peptidase M16 domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_3030_30
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(24976..26250)
-----------------
DNA (1275bp)
protein (425aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Peptidase M16 domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P0_SPHTD
peptidase M16 domain-containing protein
Displaying items 1-30 of 85 in total

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