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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_9

Organism: Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b

partial RP 42 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 10878..12539

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 553.0
  • Bit_score: 1068
  • Evalue 0.0
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=12554097 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 551.0
  • Bit_score: 845
  • Evalue 2.70e-242
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 544.0
  • Bit_score: 700
  • Evalue 3.10e-199

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1662
ATGGACGTCACCCCGGACGACGCACTGGATCCCGAGGCCCTCATCGAGGCGCCGGCCGCCCTCGAGGTGTCGGCCGAGGAGCGCAGCGCCGAGGAGGCCTCGGCGCGCCGCCTCGCCGAACGCTACCGCCTCGAGTTCCTCGACATGCACGAGTTCCGGATCGATCAGGACTTGTTCCGATCGATCCCGGCCGACCTGATGCTGCGCTACGGCTTCGTGCCGTACCGCCGCGACGGCCGCTCGCTGGTGATCGTCGTGTCGGACCCGACCGACCTGCCGATGATCGACGAGCTGTCGGTGATCCTCGGCACGCCGGTCCGCGTCATGGTGGGCGCGCGCTCCGCCATCGAGGGCATGCTGAAGAAGAGCGAGAGCTCCCAGCGCGTCCTCGACGAGGCGACCGAGGAATTCCAGATCCAGGTCCTCAAGGAAGACGAGTCGGGCGAGGACAACCTCACCGTCGAGCGGCTGACGAGCGACAGCAGCCCGATCATCCGCCTGGTGGACTCGACCATCTACACGGCGATCCAGCGGCGGGCCAGCGACATCCACATCGAGACCCAGGACGATGCGGTCTACGTGAAGTACCGCATCGACGGCGTGCTGCAGTCGGCGATGCGGCCGATCGCCAAGCGGTTTCACAGCTCGATCCTGTCGCGCATCAAGGTGATGGCGGAGCTCGACATCGCCGAGAAGCGGGTGCCGCAGGACGGCCGCTTCCGCCTGCGCGTGCCGGGCAAGACCATCGACTTCCGCGTCTCGATCATGCCGAGCGTGCACGGCGAAGACGCCGTGATCCGCATTCTCGACAAGCAGTCGATGAGCGAGCAGTTCACCGAGCTGCGGCTCGACATTCTGGGCTTCCCGGAGCCGGAGCTGAAGCGCTTCCGCAAGTACATCCGCGAGCCCTACGGCATGGTGCTGGTCACCGGGCCGACCGGCAGCGGCAAGACCACGACGCTGTACGCGGCGCTCGCCGAGATTCGCACGATCGAAGACAAGATCATCACCATCGAAGACCCGGTCGAGTACCAGCTCAAGGGGATCACACAGATTCCGATCAACGAGAAGAAGGGTCTCACCTTCGCGCGCGGGCTGCGTTCGATCCTGCGCCACGACCCGGACAAGGTGATGGTCGGCGAAATCCGCGACCCCGAGACGGCGCAGATCGCCATCCAGTCGGCGCTGACCGGCCACCTCGTGTTCACCACGGTCCACGCCAACAACGTGTTCGACGTGCTGGGGCGGTTTCTCAACATGGGCGTCGAGCCGTACCAGTTCATCTCGGCGCTCAACTGCGTGATGGCGCAGCGGCTGGTGCGCAAGATCTGCGTCGCCTGTAAGCAAGCCGCGGTCATCGATCCCGTGCTGCTGGCCGAGTCGGCGATCGATCCCGCGCTGATTGCGAAGCACACGCTCTACGAGGGCGTCGGCTGCATCGAGTGCAGCGGCACCGGGTTCAAGGGCCGCATGGCGATCTGTGAGCTGCTCGACCTGACCGATCACATCCGCGAGATGATTCTGGAGAAGCGGCCGATCTCCGAAGTCAAGCGGGCGGCCCGCGAGCAGGGCATGCGGCTGCTGCGCGAGTCGGCGGTCGAACGCGTGCTGACGGGGCAGACCACGCTGCGCGAGATCAATAAGGTGACGTTCGTCGAATGA
PROTEIN sequence
Length: 554
MDVTPDDALDPEALIEAPAALEVSAEERSAEEASARRLAERYRLEFLDMHEFRIDQDLFRSIPADLMLRYGFVPYRRDGRSLVIVVSDPTDLPMIDELSVILGTPVRVMVGARSAIEGMLKKSESSQRVLDEATEEFQIQVLKEDESGEDNLTVERLTSDSSPIIRLVDSTIYTAIQRRASDIHIETQDDAVYVKYRIDGVLQSAMRPIAKRFHSSILSRIKVMAELDIAEKRVPQDGRFRLRVPGKTIDFRVSIMPSVHGEDAVIRILDKQSMSEQFTELRLDILGFPEPELKRFRKYIREPYGMVLVTGPTGSGKTTTLYAALAEIRTIEDKIITIEDPVEYQLKGITQIPINEKKGLTFARGLRSILRHDPDKVMVGEIRDPETAQIAIQSALTGHLVFTTVHANNVFDVLGRFLNMGVEPYQFISALNCVMAQRLVRKICVACKQAAVIDPVLLAESAIDPALIAKHTLYEGVGCIECSGTGFKGRMAICELLDLTDHIREMILEKRPISEVKRAAREQGMRLLRESAVERVLTGQTTLREINKVTFVE*