| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(3..1118)
----------------- DNA (1116bp) protein (372aa) |
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein id=12554107 bin=CNBR_ACIDO species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Mg chelatase subunit ChlI
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
1228..4041
----------------- DNA (2814bp) protein (938aa) |
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z144_9BACT id=5225473 bin=16ft_combo_ws3_JS1 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(4106..5626)
----------------- DNA (1521bp) protein (507aa) |
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
lytic transglycosylase, catalytic; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] id=12554103 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic transglycosylase, catalytic
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(5910..7610)
----------------- DNA (1701bp) protein (567aa) |
acetaldehyde dehydrogenase; K00132 acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
acetaldehyde dehydrogenase; K00132 acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] id=12554102 bin=CNBR_ACIDO species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetaldehyde dehydrogenase
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(7649..7945)
----------------- DNA (297bp) protein (99aa) |
microcompartments protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
microcompartments protein id=12554101 bin=CNBR_ACIDO species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
microcompartments protein
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
7967..8854
----------------- DNA (888bp) protein (296aa) |
id=12554100 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
id=12554100 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
8857..9588
----------------- DNA (732bp) protein (244aa) |
lytic transglycosylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
lytic transglycosylase id=12554099 bin=CNBR_ACIDO species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic transglycosylase
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
9673..10878
----------------- DNA (1206bp) protein (402aa) |
pulF; type II secretion system protein PulF; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
type II secretion system protein; K02653 type IV pilus assembly protein PilC id=12554098 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pulF; type II secretion system inner membrane protein PulF
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
10878..12539
----------------- DNA (1662bp) protein (554aa) |
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=12554097 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type II secretion system protein E
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
12536..12664
----------------- DNA (129bp) protein (43aa) |
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
12683..13486
----------------- DNA (804bp) protein (268aa) |
Tfp pilus assembly protein ATPase PilM-like protein; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein; K02662 type IV pilus assembly protein PilM id=12554096 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tfp pilus assembly protein ATPase PilM-like protein
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
13489..14121
----------------- DNA (633bp) protein (211aa) |
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN id=12554095 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
14118..14720
----------------- DNA (603bp) protein (201aa) |
id=12554094 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
id=12554094 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
14710..15270
----------------- DNA (561bp) protein (187aa) |
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S3K3_9BURK
putative proline rich transmembrane protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
15224..16516
----------------- DNA (1293bp) protein (431aa) |
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(16643..16936)
----------------- DNA (294bp) protein (98aa) |
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
17386..17763
----------------- DNA (378bp) protein (126aa) |
type II secretory pathway, component PulD Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
type II secretory pathway, component PulD id=12554092 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
|
Not on your lists |
17763..18230
----------------- DNA (468bp) protein (156aa) |
prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative secretion protein; K02456 general secretion pathway protein G id=12554091 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prepilin-type N-terminal cleavage/methylation domain-containing protein
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
18307..18675
----------------- DNA (369bp) protein (123aa) |
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
type II secretion system protein G; K02456 general secretion pathway protein G id=12554090 bin=CNBR_ACIDO species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
general secretion pathway protein G
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
18707..19462
----------------- DNA (756bp) protein (252aa) |
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Uroporphyrinogen-III synthase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU38_ROSS1
uroporphyrinogen III synthase HEM4
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
19459..20724
----------------- DNA (1266bp) protein (422aa) |
histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
two-component histidine kinase id=24575396 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
histidine kinase dimerization and phosphoacceptor region
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
20736..21380
----------------- DNA (645bp) protein (215aa) |
LuxR family DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
LuxR family transcriptional regulator id=24575395 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
LuxR family transcriptional regulator
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
21452..22555
----------------- DNA (1104bp) protein (368aa) |
glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4R6_SPHTD
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
22552..23481
----------------- DNA (930bp) protein (310aa) |
Porphobilinogen deaminase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8E3_MYXSD
porphobilinogen deaminase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
porphobilinogen deaminase
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_25
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
23478..24464
----------------- DNA (987bp) protein (329aa) |
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKV0_ROSCS
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
24461..25759
----------------- DNA (1299bp) protein (433aa) |
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TI52_9PLAN
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
25756..26772
----------------- DNA (1017bp) protein (339aa) |
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIL5_HALO1
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_28
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
26760..28163
----------------- DNA (1404bp) protein (468aa) |
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IPY1_ANADE
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
28160..29536
----------------- DNA (1377bp) protein (459aa) |
protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E337_GEOLS
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RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_rifcsplowo2_12_scaffold_6279_30
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria
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Not on your lists |
29533..30468
----------------- DNA (936bp) protein (312aa) |
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Ferrochelatase, putative n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B4W6_PELLD
ferrochelatase
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