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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22..954
DNA (933bp) protein (311aa)
formyl transferase domain-containing protein (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_16_Betaproteobacteria_64_18_curated
formyl transferase domain-containing protein (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WUQ0_9RHIZ
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1381..3963
DNA (2583bp) protein (861aa)
protein kinase family protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000361D3D8
protein kinase family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3980..4804
DNA (825bp) protein (275aa)
serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16] Tax=RBG_16_Betaproteobacteria_64_18_curated
Serine/threonine protein phosphatase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNK0_AZOSU
serine/threonine protein phosphatase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_4
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4831..5670
DNA (840bp) protein (280aa)
signal peptide protein n=1 Tax=Methyloversatilis universalis RepID=UPI000371C845
FHA domain containing protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
FHA domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5711..7975
DNA (2265bp) protein (755aa)
putative transmembrane sensor domain protein; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037C07D9
adenylate/guanylate cyclase with Chase sensor
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_6
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7972..8739
DNA (768bp) protein (256aa)
Beta-lactamase domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMT8_SIDLE
beta-lactamase domain protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
beta-lactamase domain protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8776..9861
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000370FB68
Crp/Fnr family transcriptional regulator Tax=RBG_16_Betaproteobacteria_64_18_curated
Crp/Fnr family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9953..11086
DNA (1134bp) protein (378aa)
phytochrome sensor protein Tax=RBG_16_Betaproteobacteria_64_18_curated
Putative phytochrome sensor protein id=2078325 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11083..12330
DNA (1248bp) protein (416aa)
Putative phytochrome sensor protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMU0_SIDLE
phytochrome sensor protein Tax=RBG_16_Betaproteobacteria_64_18_curated
phytochrome sensor protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12395..14038
DNA (1644bp) protein (548aa)
phosphohydrolase with GAF sensor n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036FB010
HD-GYP domain-containing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
HD-GYP domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14079..14393)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002F62676
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14538..16193
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A6R3_BACTN
hypothetical protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16473..16943
DNA (471bp) protein (157aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Acinetobacter nosocomialis Ab22222 RepID=K2PG71_9GAMM
Tfp pilus assembly protein major pilin PilA Tax=RBG_16_Betaproteobacteria_64_18_curated
Tfp pilus assembly protein major pilin PilA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16978..17178
DNA (201bp) protein (67aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17185..18105
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035D6025
RfbJ protein Tax=RBG_16_Betaproteobacteria_64_18_curated
RfbJ protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18107..20107
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSM1_9BURK
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20229..20963
DNA (735bp) protein (245aa)
COG: SAM-dependent methyltransferases n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5APE4_BURRH
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20981..22210)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
multidrug ABC transporter substrate-binding protein
hypothetical protein id=14627304 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22207..22929)
DNA (723bp) protein (241aa)
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
ABC transporter
ABC transporter, ATP-binding protein, putative id=4810592 bin=GWC2_Methylomirabilis_70_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22939..24498)
DNA (1560bp) protein (520aa)
putative Efflux transporter, RND family, MFP subunit; K02005 HlyD family secretion protein Tax=RBG_16_Betaproteobacteria_64_18_curated
Efflux transporter, RND family, MFP subunit id=3746800 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RND family efflux transporter MFP subunit
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24593..25084)
DNA (492bp) protein (164aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKY0_9BURK
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RBG_16_Betaproteobacteria_64_18_curated
moaC; molybdenum cofactor biosynthesis protein C
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25239..26804
DNA (1566bp) protein (522aa)
Peptidase M48, Ste24p n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1T9_9PROT
peptidase M48, Ste24p Tax=RBG_16_Betaproteobacteria_64_18_curated
peptidase M48, Ste24p
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26827..27795)
DNA (969bp) protein (323aa)
Protein ChrB n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BGN0_9GAMM
chromate resistance protein b Tax=RBG_16_Betaproteobacteria_64_18_curated
chromate resistance protein b
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_24
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27908..29164)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTG8_SORCE
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
MFS transporter
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_25
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29190..31985)
DNA (2796bp) protein (932aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_16_Betaproteobacteria_64_18_curated
valS; valine--tRNA ligase (EC:6.1.1.9)
valyl-tRNA synthase n=1 Tax=Burkholderia kururiensis RepID=UPI00034C0D75
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32061..32507)
DNA (447bp) protein (149aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_27
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32504..32932)
DNA (429bp) protein (143aa)
DNA polymerase III chi subunit, HolC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFI5_9PROT
DNA polymerase III chi subunit, HolC Tax=RBG_16_Betaproteobacteria_64_18_curated
DNA polymerase III chi subunit, HolC
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32990..34597)
DNA (1608bp) protein (536aa)
multifunctional aminopeptidase A n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000382B9C4
leucyl aminopeptidase Tax=RBG_16_Betaproteobacteria_64_18_curated
leucyl aminopeptidase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_29
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34618..35694
DNA (1077bp) protein (359aa)
YjgP/YjgQ family permease n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABF4_9PROT
YjgP/YjgQ family permease Tax=RBG_16_Betaproteobacteria_64_18_curated
putative permease
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_30
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35694..36767
DNA (1074bp) protein (358aa)
Permease YjgP/YjgQ n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJE8_9PROT
permease YjgP/YjgQ Tax=RBG_16_Betaproteobacteria_64_18_curated
permease YjgP/YjgQ
Displaying items 1-30 of 57 in total

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