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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1329
DNA (1329bp) protein (443aa)
ubiD6; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD6 (EC:4.1.1.-) Tax=RBG_16_Betaproteobacteria_64_18_curated
ubiD6; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD6 (EC:4.1.1.-)
Putative uncharacterized protein id=1975406 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1346..1636
DNA (291bp) protein (97aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1643..3187
DNA (1545bp) protein (515aa)
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=RBG_16_Betaproteobacteria_64_18_curated
AMP-binding enzyme id=1975408 bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3224..4195
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4202..5191
DNA (990bp) protein (330aa)
Quinone oxidoreductase, YhdH/YhfP family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFR8_GALCS
YhdH/YhfP family quinone oxidoreductase Tax=RBG_16_Betaproteobacteria_64_18_curated
YhdH/YhfP family quinone oxidoreductase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..6020)
DNA (774bp) protein (258aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125); K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] Tax=RBG_16_Betaproteobacteria_64_18_curated
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125); K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] id=14625654 bin=bin7_NC10_sister species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6216..7019)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3CFC3_9RHIZ
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Betaproteobacteria_64_18_curated
Gluconate 5-dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7024..8655)
DNA (1632bp) protein (544aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_16_Betaproteobacteria_64_18_curated
Uncharacterized protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PR19_9RHIZ
thiamine pyrophosphate family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8865..10496
DNA (1632bp) protein (544aa)
dehydrogenase n=1 Tax=Martelella mediterranea RepID=UPI0003737F03
glucose-methanol-choline oxidoreductase Tax=RBG_16_Betaproteobacteria_64_18_curated
dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10493..11350)
DNA (858bp) protein (286aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Burkholderia sp. YI23 RepID=G8MFH9_9BURK
xylose isomerase domain-containing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
xylose isomerase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11388..13706)
DNA (2319bp) protein (773aa)
Putative 4-hydroxybenzoyl-CoA reductase, alpha subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F4I5_9DELT
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Betaproteobacteria_64_18_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13708..14220)
DNA (513bp) protein (171aa)
Carbon monoxide dehydrogenase, small subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9Q8_9DELT
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RBG_16_Betaproteobacteria_64_18_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14217..15128)
DNA (912bp) protein (304aa)
molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein-like; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RBG_16_Betaproteobacteria_64_18_curated
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VY40_9CLOT
pcmR; 4-hydroxybenzoyl-CoA reductase flavoprotein subunit
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15461..15922
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSE3_HALO1
MarR family transcriptional regulator Tax=RBG_16_Betaproteobacteria_64_18_curated
MarR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16000..17529)
DNA (1530bp) protein (510aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_16_Betaproteobacteria_64_18_curated
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B05_RHOPB
AMP-dependent synthetase and ligase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17570..18022)
DNA (453bp) protein (151aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDG8_9BRAD
hypothetical protein; K07068 Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18019..19191)
DNA (1173bp) protein (391aa)
thiolase n=1 Tax=Amorphus coralli RepID=UPI0003612FD0
thiolase Tax=RBG_16_Betaproteobacteria_64_18_curated
thiolase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2744_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19275..20801)
DNA (1527bp) protein (509aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Betaproteobacteria_64_18_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2U7L5_RALPJ
3-hydroxybutyryl-CoA dehydrogenase
Displaying 18 items

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