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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1473)
-----------------
DNA (1473bp)
protein (491aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003741014
CoA-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
CoA-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1818..3332
-----------------
DNA (1515bp)
protein (505aa)
3-hydroxybenzoate--CoA ligase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003626ED0
hbcL; 3-hydroxybenzoate CoA ligase Tax=RBG_16_Betaproteobacteria_64_18_curated
hbcL; 3-hydroxybenzoate CoA ligase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3459..4739)
-----------------
DNA (1281bp)
protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMR8_ACCPU
major facilitator superfamily protein Tax=RBG_16_Betaproteobacteria_64_18_curated
major facilitator superfamily protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4813..5358)
-----------------
DNA (546bp)
protein (182aa)
Rhodanese domain protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAU3_9PROT
Rhodanese domain protein Tax=RBG_16_Betaproteobacteria_64_18_curated
Rhodanese domain protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5462..9151
-----------------
DNA (3690bp)
protein (1230aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RBG_16_Betaproteobacteria_64_18_curated
metH; B12-dependent methionine synthase (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YD17_NITMU
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9232..10476)
-----------------
DNA (1245bp)
protein (415aa)
Two component sigma-54 specific Fis family transcriptional regulator n=2 Tax=Thauera RepID=N6XM95_9RHOO
two component, sigma54 specific, Fis family transcriptional regulator Tax=RBG_16_Betaproteobacteria_64_18_curated
two component, sigma54 specific, Fis family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10485..12608)
-----------------
DNA (2124bp)
protein (708aa)
Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHR6_AZOSU
signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation Tax=RBG_16_Betaproteobacteria_64_18_curated
signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12605..13168)
-----------------
DNA (564bp)
protein (188aa)
Putative exported protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RFI6_9RHOO
proline rich signal peptide protein Tax=RBG_16_Betaproteobacteria_64_18_curated
proline rich signal peptide protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13168..14451)
-----------------
DNA (1284bp)
protein (428aa)
Sun protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADW2_9PROT
sun protein Tax=RBG_16_Betaproteobacteria_64_18_curated
ribosomal RNA small subunit methyltransferase RsmB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14647..15573)
-----------------
DNA (927bp)
protein (309aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_16_Betaproteobacteria_64_18_curated
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=FMT_DECAR
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_11
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15588..16091)
-----------------
DNA (504bp)
protein (168aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Peptide deformylase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHS3_AZOSU
peptide deformylase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16201..17247
-----------------
DNA (1047bp)
protein (349aa)
Peptidoglycan-binding lysin domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAL8_9PROT
peptidoglycan-binding lysin domain-containing protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
peptidoglycan-binding lysin domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17278..18351
-----------------
DNA (1074bp)
protein (358aa)
DNA processing protein DprA; K04096 DNA processing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
DNA protecting protein DprA id=3976413 bin=GWC2_Elusimicrobia_51_8 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA processing protein DprA
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_14
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18369..18827
-----------------
DNA (459bp)
protein (153aa)
hypothetical protein; K03747 Smg protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Protein smg homolog id=3976414 bin=GWC2_Elusimicrobia_51_8 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_3573_15
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19158..19583
-----------------
DNA (426bp)
protein (142aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AIZ7_NITEC
Displaying 15 items

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