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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..555
-----------------
DNA (555bp)
protein (185aa)
UDP-N-acetylmuramate n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IYT6_PSEUL
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

549..1163
-----------------
DNA (615bp)
protein (205aa)
esterase; K07000 id=12494043 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
esterase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1126..2268)
-----------------
DNA (1143bp)
protein (381aa)
L-rhamnonate dehydratase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LED6_BURGS
L-rhamnonate dehydratase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2509..4356
-----------------
DNA (1848bp)
protein (616aa)
Exoribonuclease R n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPK4_AZOSU
ribonuclease II
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4412..5317
-----------------
DNA (906bp)
protein (302aa)
TonB family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPK3_AZOSU
TonB family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5345..6154
-----------------
DNA (810bp)
protein (270aa)
Shikimate dehydrogenase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE76_9PROT
shikimate 5-dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6162..6881
-----------------
DNA (720bp)
protein (240aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=MTGA_LARHH
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6945..8189)
-----------------
DNA (1245bp)
protein (415aa)
Permease of the major facilitator superfamily n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHG1_9PROT
major facilitator transporter
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8245..9816
-----------------
DNA (1572bp)
protein (524aa)
Mg2+ transporter MgtE n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPJ9_AZOSU
Mg2+ transporter MgtE
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9851..11134)
-----------------
DNA (1284bp)
protein (428aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADU5_9PROT
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11131..11808)
-----------------
DNA (678bp)
protein (226aa)
Thiamine-phosphate synthase n=1 Tax=Azoarcus sp. KH32C RepID=H0PT74_9RHOO
thiE; thiamine-phosphate pyrophosphorylase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11805..12641)
-----------------
DNA (837bp)
protein (279aa)
Phosphomethylpyrimidine kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGJ3_AZOSU
phosphomethylpyrimidine kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12860..13045
-----------------
DNA (186bp)
protein (62aa)
Rubredoxin n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IRX7_HERSS
rubredoxin protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13197..13604
-----------------
DNA (408bp)
protein (136aa)
Pilus protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y5G3_9RHOO
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13615..13980
-----------------
DNA (366bp)
protein (122aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGJ0_AZOSU
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13995..14504
-----------------
DNA (510bp)
protein (170aa)
Chemotaxis signal transduction protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGI9_AZOSU
chemotaxis signal transduction protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14542..16710
-----------------
DNA (2169bp)
protein (723aa)
Methyl-accepting chemotaxis protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGI8_AZOSU
methyl-accepting chemotaxis protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16738..21939
-----------------
DNA (5202bp)
protein (1734aa)
CheA signal transduction histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK06_ACCPU
CheA signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22099..22659
-----------------
DNA (561bp)
protein (187aa)
UPF0301 protein SCD_n00212 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE90_9PROT
algH; hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22656..23096
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036B32D9
Holliday junction resolvase YqgF
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23083..23601
-----------------
DNA (519bp)
protein (173aa)
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Phosphoribosyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y652_NITMU
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23601..24551
-----------------
DNA (951bp)
protein (317aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EG84_9BURK
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_15589_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24558..25607
-----------------
DNA (1050bp)
protein (350aa)
pyrC; dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAT7_9PROT
Displaying 23 items

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