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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_1
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

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1..1191
-----------------
DNA (1191bp)
protein (397aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B5C2C3
outer membrane protein MtrB Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
outer membrane protein MtrB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_2
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

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1453..1857
-----------------
DNA (405bp)
protein (135aa)
Regulatory protein, FmdB family n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2SX40_BURPP
hypothetical protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
FmdB family regulatory protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_3
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1980..2579
-----------------
DNA (600bp)
protein (200aa)
membrane protein n=1 Tax=Methyloversatilis universalis RepID=UPI00035FCC44
hypothetical protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2648..4429
-----------------
DNA (1782bp)
protein (594aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_16_Betaproteobacteria_64_18_curated
Aspartate--tRNA ligase n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYS7_9BURK
aspartyl-tRNA synthetase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_5
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4521..4973
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P282_AROAE
hypothetical protein Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_6
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4966..5460
-----------------
DNA (495bp)
protein (165aa)
ntpA; dATP pyrophosphohydrolase; K08310 dATP pyrophosphohydrolase [EC:3.6.1.-] Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
Dihydroneopterin triphosphate pyrophosphatase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IE3_DECAR
ntpA; dATP pyrophosphohydrolase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5666..6421
-----------------
DNA (756bp)
protein (252aa)
Predicted endonuclease / exonuclease / phosphatase family protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2K3_AROAE
endonuclease / exonuclease / phosphatase family protein; K06896 Tax=RBG_16_Betaproteobacteria_64_18_curated
endonuclease / exonuclease / phosphatase family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6418..7578
-----------------
DNA (1161bp)
protein (387aa)
Phospholipase D/transphosphatidylase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIZ0_9PROT
phospholipase D/transphosphatidylase Tax=RBG_16_Betaproteobacteria_64_18_curated
phospholipase D/transphosphatidylase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7931..8668
-----------------
DNA (738bp)
protein (246aa)
class II aldolase/adducin domain protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17] Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI00035DE221
aldolase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8761..11085)
-----------------
DNA (2325bp)
protein (775aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FB7F5D
cutL; carbon monoxide dehydrogenase Tax=RBG_16_Betaproteobacteria_64_18_curated
cutL; carbon monoxide dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11332..12375)
-----------------
DNA (1044bp)
protein (348aa)
amidohydrolase 2; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=RBG_16_Betaproteobacteria_64_18_curated
Probable 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase id=1836188 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase 2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12549..13865)
-----------------
DNA (1317bp)
protein (439aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Azoarcus toluclasticus RepID=UPI000382B830
dctM3; putative TRAP-type C4-dicarboxylate transport system large permease Tax=RBG_16_Betaproteobacteria_64_18_curated
putative TRAP-type C4-dicarboxylate transport system large permease
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13869..14381)
-----------------
DNA (513bp)
protein (171aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031E01C3
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease Tax=RBG_16_Betaproteobacteria_64_18_curated
TRAP dicarboxylate transporter subunit DctQ
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14436..15422)
-----------------
DNA (987bp)
protein (329aa)
ABC transporter substrate-binding protein n=2 Tax=Alcaligenes RepID=U1YCK7_9BURK
putative periplasmic substrate binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
TRAP dicarboxylate transporter subunit DctP
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_4483_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15588..16130)
-----------------
DNA (543bp)
protein (181aa)
UbiD family decarboxylase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6P0_9CLOT
ubiD; decarboxylase ubiD Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
Displaying 15 items

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