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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_5477_16

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: comp(13962..14477)

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor RpoE negative regulatory protein RseA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIT8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 183.0
  • Bit_score: 125
  • Evalue 4.50e-26
anti sigma-E protein, RseA Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 171.0
  • Bit_score: 327
  • Evalue 8.30e-87
anti sigma-E protein, RseA similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 174.0
  • Bit_score: 111
  • Evalue 3.20e-22

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGATGAGCGAGCGAATTTCCATGCTGATGGACGGCGAAGCGGATGAATCGGACCTGGCGCGGAATCTGGTTCTCCTCAGGAGCGACGCCCAACTGCGGCGCAGTTGGGACACCTACCATCTGATCGGCGATGCCCTGCGCGGACACGTCGAACCGGCGCTGGCCGCAAGGGTGTCGGAGCGATTGGCCGCAGAACCCACCGTGCTTGCCCCTCGACGACTCGCAACCAGAGGCAGGATCCCGCGGCTCGCGTTTTCCGCCGCGGCGGGTGTGGCGGGTGTCGCGCTGGTGGCCTGGCTGGCGCTGCCGGGACTGAAGAGCGAGCCGCAGCAGGTTGCCGCGACCGTACCACCGCGCGCACCGACCGCCGCGTCCGTGCCTGCGGTCACGCCAGCGGCGGTGGGCGTGGATAGCTATCTGCTTGCGCACCAGAGCTTCTCGCCCGCGGGGGCCATGCAGGGCGTTGCGTCTTACGTGCGCACGGTAGCCGATGAACGCGGGGGGCGCGACAAGTGA
PROTEIN sequence
Length: 172
MMSERISMLMDGEADESDLARNLVLLRSDAQLRRSWDTYHLIGDALRGHVEPALAARVSERLAAEPTVLAPRRLATRGRIPRLAFSAAAGVAGVALVAWLALPGLKSEPQQVAATVPPRAPTAASVPAVTPAAVGVDSYLLAHQSFSPAGAMQGVASYVRTVADERGGRDK*