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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_2593_34

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: comp(38081..38581)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMF9_SIDLE similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 166.0
  • Bit_score: 235
  • Evalue 3.90e-59
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 166.0
  • Bit_score: 329
  • Evalue 3.60e-87
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 166.0
  • Bit_score: 235
  • Evalue 1.10e-59

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGTTCGCGGTTCGCGACGGGGAGGTTGCACTGGACATCGTGCAGGATGTGATGTTGAAGCTGGCCGAAAAGTACGGCGACAAGCCCGCCGAGGAACTGCCGATGCTGTTCCAGCGCATCCTGCAGAACACGATCCGGGATTTCTATCGCCGACAGAAGGTTCGCTCGCGGTGGATCACCTTGCTTTCAGCGCTGTCCCCGGGTCGGGACGAGGACGAGTCCGATGCGCTCGAGACCATGGAAACCGAAGATCATTCCAGTCTGGGGTTAGGGCCGGCCGAACATCTGGAGAAATCCCAACTAATTGAAATAATTGACAAAGAGCTCAAGAAGCTGCCGCCACGTCAACGAGAGGCCTTCCTGCTGCGTTACTGGGAGGAATTGGACGTTGCCGAAACGGCCGCTGTGATGGGCTGCTCAGAAGGCAGCGTAAAGACGCATTGCTCACGCGCTGCGCATGCCCTTGCGACTGCCCTGCGGACGAAGGGAATAGACCTATGA
PROTEIN sequence
Length: 167
MFAVRDGEVALDIVQDVMLKLAEKYGDKPAEELPMLFQRILQNTIRDFYRRQKVRSRWITLLSALSPGRDEDESDALETMETEDHSSLGLGPAEHLEKSQLIEIIDKELKKLPPRQREAFLLRYWEELDVAETAAVMGCSEGSVKTHCSRAAHALATALRTKGIDL*