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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_4

Organism: Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_110

near complete RP 41 / 55 BSCG 41 / 51 MC: 1 ASCG 7 / 38
Location: 4520..5599

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY4_AZOSU similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 358.0
  • Bit_score: 502
  • Evalue 2.80e-139
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RBG_16_Betaproteobacteria_64_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 359.0
  • Bit_score: 688
  • Evalue 3.90e-195
type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 358.0
  • Bit_score: 501
  • Evalue 1.80e-139

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Taxonomy

RBG_16_Betaproteobacteria_64_18_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
TTGGCGCTCGATTTCGACATCTTCAAACCGAAGGCCCAGCCTTTGTTCGGGATGGACATCAGTTCGTCCTCGATCAAAATGGTGGAGCTCGTGGACGCGGGCAAGGGTGCCATCCGCGTGGAGCGGTACGTGATCGAGCCCCTTCCCAAGGAAGCGGTCGTCGACGGCAGCATCGCCAACCTCGAGGCGGTGGAAGAGACCGTCGGGCGCGGCTGGAAGAAACTGGCGACGCGCACCAAGAACGTCGCCATGGCGTTGCCCACGGCGGCAGTGATCACCAAGAAGATCATCGTGCCTGCCGGCCTTCGGGAAGAAGAACTCGAACTGCAGGTAGAAACGGAGGCGAACCAGTACATTCCGTTCGCGCTCGAGGAAGTGAATCTGGACTTCCAGGTCGTCGGGCCGGCGCCCTCCTCCCCCGAGGAGGTGGAAGTGCTGATCGCGGCCTCGCGCAAGGAGAGAGTCGAGGACCGGGTCGCCGTCGCGCAGGCTGCGGGCCTCAAGGCCCTGGTCATGGACGTCGAGTCCTATGCCATGCAGGCGGCCTTCGACCTGATCAAGAAACAGTTTCCGAACGATGCCAAGGACCAGAATATCGCGCTGGTCGACGTCGGTGCCAATGTCATGAACATCACGGTGCTGCGAAACGAGCAGCCCGTGTACACGCGCGAGCAGGCGTTCGGGGGCAATCAGCTCACCCAGGACATCATGCGCCAGTACGGCATGAGCCATGAGGAGGCCGAAGCGGCCAAGCGCTCAGGCGGCCTGCCGGAAACCTACGACGCAGAGGTGCTGCGCCCGTTCATAGAGAACGCGGCGCTCGAGATCCAGCGTGCGATGCAGTTTTTCTTCACCTCGACGCAATTCAACAGCATCGAGCACATTCTGCTGTTCGGCGGCTCGGCGGCGATACCCGGTCTGGAAGAGGCCGTGTCCACGCGCACTCAGGTCAACACCCTGATTGCCAACCCCTTTGCCAGCATGGCCGTCAACCCGCGGATTCAGTTGAAAAAGCTGATCGCCGACGCGCCTTCGCTGATGATCGCCTGCGGCCTGGCCATGCGGAGGTTCGACACGTGA
PROTEIN sequence
Length: 360
LALDFDIFKPKAQPLFGMDISSSSIKMVELVDAGKGAIRVERYVIEPLPKEAVVDGSIANLEAVEETVGRGWKKLATRTKNVAMALPTAAVITKKIIVPAGLREEELELQVETEANQYIPFALEEVNLDFQVVGPAPSSPEEVEVLIAASRKERVEDRVAVAQAAGLKALVMDVESYAMQAAFDLIKKQFPNDAKDQNIALVDVGANVMNITVLRNEQPVYTREQAFGGNQLTQDIMRQYGMSHEEAEAAKRSGGLPETYDAEVLRPFIENAALEIQRAMQFFFTSTQFNSIEHILLFGGSAAIPGLEEAVSTRTQVNTLIANPFASMAVNPRIQLKKLIADAPSLMIACGLAMRRFDT*