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RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(148..1392)
-----------------
DNA (1245bp)
protein (415aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=RBG_16_Betaproteobacteria_64_18_curated
Diaminopimelate decarboxylase n=1 Tax=Thauera phenylacetica B4P RepID=N7A2I7_9RHOO
diaminopimelate decarboxylase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1548..1874
-----------------
DNA (327bp)
protein (109aa)
frataxin n=1 Tax=Methyloversatilis universalis RepID=UPI0003706C5B
iron donor protein CyaY; K06202 CyaY protein Tax=RBG_16_Betaproteobacteria_64_18_curated
iron donor protein CyaY
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2046..4343)
-----------------
DNA (2298bp)
protein (766aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RBG_16_Betaproteobacteria_64_18_curated
Penicillin-binding protein, 1A family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY3_AZOSU
penicillin-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4520..5599
-----------------
DNA (1080bp)
protein (360aa)
Type IV pilus assembly protein PilM n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY4_AZOSU
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RBG_16_Betaproteobacteria_64_18_curated
type IV pilus assembly protein PilM
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5596..6204
-----------------
DNA (609bp)
protein (203aa)
Tfp pilus assembly protein PilN n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY5_AZOSU
Tfp pilus assembly protein PilN; K02663 type IV pilus assembly protein PilN Tax=RBG_16_Betaproteobacteria_64_18_curated
Tfp pilus assembly protein PilN
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6211..6858
-----------------
DNA (648bp)
protein (216aa)
Tfp pilus assembly protein PilO n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY6_AZOSU
Tfp pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=RBG_16_Betaproteobacteria_64_18_curated
Tfp pilus assembly protein PilO
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6855..7376
-----------------
DNA (522bp)
protein (174aa)
Tfp pilus assembly protein PilP n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKY7_AZOSU
Tfp pilus assembly protein PilP; K02665 type IV pilus assembly protein PilP Tax=RBG_16_Betaproteobacteria_64_18_curated
Tfp pilus assembly protein PilP
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7376..9457
-----------------
DNA (2082bp)
protein (694aa)
secretin n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037613E7
pilQ; PilQ type IV pilus assembly protein; K02666 type IV pilus assembly protein PilQ Tax=RBG_16_Betaproteobacteria_64_18_curated
pilQ; PilQ type IV pilus assembly protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9581..10081
-----------------
DNA (501bp)
protein (167aa)
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RBG_16_Betaproteobacteria_64_18_curated
shikimate kinase n=1 Tax=Aquaspirillum serpens RepID=UPI0003B32927
shikimate kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_10
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10063..11142
-----------------
DNA (1080bp)
protein (360aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RBG_16_Betaproteobacteria_64_18_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Azoarcus sp. (strain BH72) RepID=AROB_AZOSB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11294..11770
-----------------
DNA (477bp)
protein (159aa)
Tax=RBG_16_Betaproteobacteria_64_18_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11779..13923
-----------------
DNA (2145bp)
protein (715aa)
Type II and III secretion system protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ3_9GAMM
gspD2; general secretory pathway protein D; K02453 general secretion pathway protein D Tax=RBG_16_Betaproteobacteria_64_18_curated
gspD2; general secretory pathway protein D
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13920..15419
-----------------
DNA (1500bp)
protein (500aa)
General secretory pathway protein E n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B3B5_9PROT
general secretory pathway protein E Tax=RBG_16_Betaproteobacteria_64_18_curated
general secretory pathway protein E
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_110_rifcsplowo2_12_scaffold_6039_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15437..16441
-----------------
DNA (1005bp)
protein (335aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003633EEC
gspF2; general secretion pathway protein F; K02455 general secretion pathway protein F Tax=RBG_16_Betaproteobacteria_64_18_curated
gspF2; general secretion pathway protein F
Displaying 14 items

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