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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..910)
DNA (909bp) protein (303aa)
OmpA/MotB; K03286 OmpA-OmpF porin, OOP family Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
OmpA/MotB; K03286 OmpA-OmpF porin, OOP family id=5079318 bin=GWF1_Burkholderiales_GWF1_66_17 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
OmpA/MotB
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1178..1879
DNA (702bp) protein (234aa)
cyclic nucleotide-binding domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative Crp/Fnr family transcriptional regulator id=1274248 bin=GWE1_Burkholderiales_65_30 species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
cyclic nucleotide-binding domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2379..2594)
DNA (216bp) protein (72aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Putative uncharacterized protein id=1274247 bin=GWE1_Burkholderiales_65_30 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2862..3359
DNA (498bp) protein (166aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Methionine-R-sulfoxide reductase id=1274269 bin=GWE1_Burkholderiales_65_30 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3392..3835
DNA (444bp) protein (148aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=5079299 bin=GWF1_Burkholderiales_GWF1_66_17 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptide methionine sulfoxide reductase (EC:1.8.4.11)
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_103514_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3991..4146
DNA (156bp) protein (52aa)
ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC transporter related protein id=1274265 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
ABC-type antimicrobial peptide transport system, ATPase component
Displaying 6 items

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