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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..328
DNA (327bp) protein (109aa)
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ89_9BURK
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1038..1469)
DNA (432bp) protein (144aa)
Histone family protein DNA-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IEA3_9BURK
histone family protein DNA-binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
histone family protein DNA-binding protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2107..3333)
DNA (1227bp) protein (409aa)
cytochrome P450 n=1 Tax=Salinispora tropica RepID=UPI000368FA6F
cytochrome P450 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
cytochrome P450
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..4780)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM74 RepID=J2UPT8_9PSED
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4796..5584)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002F4016C
acyl-CoA thioesterase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5606..6070)
DNA (465bp) protein (155aa)
id=12553632 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
id=12553632 bin=BDI tax=BDI organism_group=Betaproteobacteria
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6077..6739)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WAL5_9BURK
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6773..7072)
DNA (300bp) protein (100aa)
id=5079166 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
id=5079166 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7258..7752
DNA (495bp) protein (165aa)
transcriptional regulator domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Transcriptional regulator domain protein id=1267935 bin=GWE1_Burkholderiales_65_30 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
transcriptional regulator domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7780..8799
DNA (1020bp) protein (340aa)
transcriptional regulator domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
transcriptional regulator domain-containing protein id=5079165 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
transcriptional regulator domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9229..10311
DNA (1083bp) protein (361aa)
integrase n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002557658
phage integrase family protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
phage integrase family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10320..10910)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037448CE
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10935..11072)
DNA (138bp) protein (46aa)
transposase n=2 Tax=Pseudomonas fuscovaginae RepID=UPI0002DFB09C
transposase IS66 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
transposase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11305..12534
DNA (1230bp) protein (410aa)
Putative Phage integrase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTR0_THIA3
putative Phage integrase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative Phage integrase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12531..13493
DNA (963bp) protein (321aa)
Putative Phage integrase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTQ9_THIA3
putative Phage integrase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative Phage integrase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13490..14494
DNA (1005bp) protein (335aa)
Putative Phage integrase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CTQ8_THIA3
putative Phage integrase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
putative Phage integrase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_17
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15117..16358
DNA (1242bp) protein (414aa)
Integrase/recombinase n=1 Tax=Burkholderia terrae BS001 RepID=I5CCG2_9BURK
phage integrase/recombinase family protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
phage integrase/recombinase family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16358..17326
DNA (969bp) protein (323aa)
Phage integrase family protein n=1 Tax=mine drainage metagenome RepID=T0Z6E4_9ZZZZ
integrase/recombinase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
integrase/recombinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_19
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17323..18336
DNA (1014bp) protein (338aa)
Phage integrase family protein n=2 Tax=mine drainage metagenome RepID=T0Y1D4_9ZZZZ
integrase/recombinase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
integrase/recombinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3400_20
unknown

Not on your lists

18644..18709
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 20 items

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