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RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..281)
DNA (279bp) protein (93aa)
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC-2 type transporter; K09686 antibiotic transport system permease protein id=5080018 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ABC transporter
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(263..1462)
DNA (1200bp) protein (400aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=1262577 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_3
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1459..2460)
DNA (1002bp) protein (334aa)
YVTN beta-propeller repeat-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
40-residue YVTN family beta-propeller repeat protein id=1262576 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2670..3692
DNA (1023bp) protein (341aa)
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein id=5080015 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3689..4429
DNA (741bp) protein (247aa)
ABC transporter-like protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC transporter-like protein id=5080014 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ABC transporter-like protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..5839)
DNA (1020bp) protein (340aa)
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YLE3_9PROT
putative ABC transporter periplasmic binding protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_7
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5836..6201)
DNA (366bp) protein (122aa)
Soluble cytochrome f n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YQW3_9PROT
exaA; alcohol dehydrogenase large subunit Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_8
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6363..8030)
DNA (1668bp) protein (556aa)
quinoprotein ethanol dehydrogenase; K00114 alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Quinohemoprotein alcohol dehydrogenase ADH IIB n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YGH9_9PROT
quinoprotein ethanol dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8413..9594)
DNA (1182bp) protein (394aa)
pyrroloquinoline quinone biosynthesis protein PqqE n=1 Tax=Azoarcus toluclasticus RepID=UPI0003655086
pqqE; pyrroloquinoline quinone biosynthesis protein PqqE; K06139 pyrroloquinoline quinone biosynthesis protein E Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
pqqE; pyrroloquinoline quinone biosynthesis protein PqqE
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9650..9934)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037807F0
pqqD; pyrroloquinoline quinone biosynthesis protein D Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
pqqD; pyrroloquinoline quinone biosynthesis protein D
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_11
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9931..10668)
DNA (738bp) protein (246aa)
Pyrroloquinoline-quinone synthase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q3B4_9RHOO
pqqC; pyrroloquinoline quinone biosynthesis protein C Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
pqqC; pyrroloquinoline quinone biosynthesis protein C
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_12
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10665..11582)
DNA (918bp) protein (306aa)
Coenzyme PQQ synthesis protein B n=1 Tax=Azoarcus sp. KH32C RepID=H0Q3B3_9RHOO
pqqB; pyrroloquinoline quinone biosynthesis protein B Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
pqqB; pyrroloquinoline quinone biosynthesis protein B
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11883..12980
DNA (1098bp) protein (366aa)
Proline iminopeptidase n=1 Tax=Thauera sp. 27 RepID=N6WZM5_9RHOO
proline iminopeptidase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
proline iminopeptidase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12977..14359
DNA (1383bp) protein (461aa)
histidine kinase; K07675 two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000381D529
histidine kinase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_15
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14337..14972
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B3A55
LuxR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
LuxR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14962..15201)
DNA (240bp) protein (80aa)
ABC-2 type transporter n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPR6_VARPS
ABC transporter; K09686 antibiotic transport system permease protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
ABC transporter
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_17
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15296..15955)
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ60_9BURK
TetR family transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16100..17293)
DNA (1194bp) protein (398aa)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ61_9BURK
acyl-CoA dehydrogenase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
acyl-CoA dehydrogenase
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_19
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17337..19118)
DNA (1782bp) protein (594aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ62_9BURK
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_20
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19150..19641)
DNA (492bp) protein (164aa)
Thioesterase family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ63_9BURK
Thioesterase family protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_21
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19680..21320)
DNA (1641bp) protein (547aa)
Beta-lactamase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ64_9BURK
beta-lactamase domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
beta-lactamase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_22
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21364..22818)
DNA (1455bp) protein (485aa)
VWA containing CoxE family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ65_9BURK
VWA containing CoxE family protein; K07161 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
VWA containing CoxE family protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_23
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22802..23770)
DNA (969bp) protein (323aa)
AAA_5 ATPase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ66_9BURK
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_24
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23742..24902)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ67_9BURK
acyl-CoA dehydrogenase domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
acyl-CoA dehydrogenase domain-containing protein
RIFCSPLOWO2_12_FULL_Betaproteobacteria_67_210_rifcsplowo2_12_scaffold_3811_25
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24899..25051)
DNA (153bp) protein (51aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZ68_9BURK
acyl-CoA dehydrogenase-like protein
Displaying 25 items

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