ggKbase home page

RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_1
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..782)
DNA (780bp) protein (260aa)
Magnesium Mg(2+) and cobalt Co(2+) transport protein CorA n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRX5_9BURK
corA; transport protein; K03284 magnesium transporter Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
corA; transport protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_2
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1138..2076
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00031BEC14
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
bacterial regulatory helix-turn-helix, lysR family protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_3
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2143..3375
DNA (1233bp) protein (411aa)
Acyl-CoA dehydrogenase family protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YTP1_OLEAN
acyl-CoA dehydrogenase family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
acyl-CoA dehydrogenase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_4
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3377..4069
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UMT9_MYXSD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4154..5098
DNA (945bp) protein (315aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XQ24_PSEMY
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
alpha/beta hydrolase fold protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_6
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5104..6219)
DNA (1116bp) protein (372aa)
acetyltransferase n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI000289E355
pslL; putative acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
pslL; putative acetyltransferase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_7
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6455..8641)
DNA (2187bp) protein (729aa)
malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
malate synthase G (EC:2.3.3.9)
Malate synthase G n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYI1_LEPCP
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_8
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8816..9739
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BB2C6
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
LysR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_9
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9798..10253
DNA (456bp) protein (152aa)
membrane protein n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DCF48
hypothetical protein; K08983 putative membrane protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_10
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10310..10576)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI0003817A61
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10688..12025)
DNA (1338bp) protein (446aa)
Serine/threonine-protein kinase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SC27_METPP
serine/threonine-protein kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
serine/threonine-protein kinase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12166..13857
DNA (1692bp) protein (564aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A05B2
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_13
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13889..14578
DNA (690bp) protein (230aa)
Hypothetical transmembrane protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HY47_RUBGI
transmembrane protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
transmembrane protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14638..15288
DNA (651bp) protein (217aa)
dsbA; thiol:disulfide interchange protein DsbA (EC:5.3.4.1); K03673 thiol:disulfide interchange protein DsbA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
dsbA; thiol:disulfide interchange protein DsbA (EC:5.3.4.1)
Thiol:disulfide interchange protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HY48_RUBGI
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_15
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15375..15980
DNA (606bp) protein (202aa)
OstA-like protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SC23_METPP
OstA-like protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
OstA-like protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15980..16747
DNA (768bp) protein (256aa)
ATP-binding ABC transporter protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Putative ATP-binding ABC transporter protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SC22_METPP
ATP-binding ABC transporter protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_17
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16762..18300
DNA (1539bp) protein (513aa)
RNA polymerase subunit sigma-54 n=1 Tax=Caldimonas manganoxidans RepID=UPI00036F1F7D
RNA polymerase sigma N (sigma 54) factor transcription regulator protein; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
RNA polymerase sigma N (sigma 54) factor transcription regulator protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_18
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18396..19106
DNA (711bp) protein (237aa)
Putative membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM12_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_19
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19136..20827
DNA (1692bp) protein (564aa)
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
RNA methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B47748
putative RNA methylase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_2394_20
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21229..22011)
DNA (783bp) protein (261aa)
rsmE; ribosomal RNA small subunit methyltransferase E RsmE (EC:2.1.1.-); K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rsmE; ribosomal RNA small subunit methyltransferase E RsmE (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSI5_9BURK
Displaying 20 items

View Taxonomy