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RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..157
DNA (156bp) protein (52aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037914A9
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacter
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_2
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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234..545
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVF2_9BURK
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
rpsJ; 30S ribosomal protein S10
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_3
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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846..1520
DNA (675bp) protein (225aa)
50S ribosomal protein L3 n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C2FBB
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rplC; 50S ribosomal protein L3
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_4
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1520..2143
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RL4_METPP
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rplD; 50S ribosomal protein L4
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2140..2454
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=1 Tax=Caldimonas manganoxidans RepID=UPI00035F7119
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rplW; 50S ribosomal protein L23
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_6
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2457..3281
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003486267
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rplB; 50S ribosomal protein L2
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_7
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3295..3570
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Caldimonas manganoxidans RepID=UPI0003690142
rpsS; 30S ribosomal protein S19 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rpsS; 30S ribosomal protein S19
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_8
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3583..3912
DNA (330bp) protein (110aa)
50S ribosomal protein L22 n=1 Tax=Limnohabitans RepID=UPI0002F8E1CF
rplV; 50S ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_9
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3926..4789
DNA (864bp) protein (288aa)
30S ribosomal protein S3 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RS3_LEPCP
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rpsC; 30S ribosomal protein S3
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_10
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4792..5208
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL16_LEPCP
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5230..5430
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL29_LEPCP
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
50S ribosomal protein L29
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5427..5696
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RS17_LEPCP
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
rpsQ; 30S ribosomal protein S17
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_13
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5822..6328
DNA (507bp) protein (169aa)
peroxiredoxin n=1 Tax=Caldimonas manganoxidans RepID=UPI000367B635
peroxiredoxin-2D-like Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_14
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6605..7723
DNA (1119bp) protein (373aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000303E585
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_15
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7846..8538
DNA (693bp) protein (231aa)
NarL family response regulator n=1 Tax=Ralstonia sp. GA3-3 RepID=R7X8Z9_9RALS
h16_A3043; response regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
LuxR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_16
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8535..10370
DNA (1836bp) protein (612aa)
Transcriptional regulator RpfC family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GM49_CUPNN
RpfC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
RpfC family transcriptional regulator
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_17
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10345..10845)
DNA (501bp) protein (167aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J1EHD5_9BURK
marR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
marR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_18
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10909..12246)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F64579
major facilitator transporter; K08195 MFS transporter, AAHS family, 4-hydroxybenzoate transporter Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
major facilitator transporter
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_19
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12433..13071)
DNA (639bp) protein (213aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Maleylpyruvate isomerase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=Q3S4B4_POLNA
maleylacetoacetate isomerase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_20
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13090..13791)
DNA (702bp) protein (234aa)
fumarylacetoacetate (FAA) hydrolase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Fumarylpyruvate hydrolase id=1287797 bin=GWE1_Burkholderiales_65_30 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
fumarylacetoacetate (FAA) hydrolase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_21
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13872..14927)
DNA (1056bp) protein (352aa)
Gentisate 1,2-dioxygenase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQ32_POLNA
cupin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
cupin
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_22
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14946..16148)
DNA (1203bp) protein (401aa)
salicylate hydroxylase; K00480 salicylate hydroxylase [EC:1.14.13.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
3-hydroxybenzoate 6-hydroxylase n=1 Tax=Pseudomonas fluorescens RepID=UPI0003813394
salicylate hydroxylase
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_23
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16325..17431)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCA1_METPP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_rifcsplowo2_12_scaffold_3723_24
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17481..17747)
DNA (267bp) protein (89aa)
magnesium transporter n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0003034A1C
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
magnesium and cobalt transport protein CorA
Displaying 24 items

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