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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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3..449
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000370B5B5
zinc finger protein; K07040 uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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461..646
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036B1DE1
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
50S ribosomal protein L32
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

660..1739
DNA (1080bp) protein (360aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Phosphate acyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YMC1_9BACT
putative glycerol-3-phosphate acyltransferase PlsX
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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1816..2802
DNA (987bp) protein (329aa)
fabH-2; 3-oxoacyl-ACP synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
3-oxoacyl-ACP synthase
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=4127756 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2906..3847
DNA (942bp) protein (314aa)
ACP S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ACP S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z2B7_9BACT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

3944..4681
DNA (738bp) protein (246aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase id=3030327 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4764..4994
DNA (231bp) protein (77aa)
acyl carrier protein (ACP); K02078 acyl carrier protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
acpP; acyl carrier protein; K02078 acyl carrier protein id=12555167 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acyl carrier protein (ACP)
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5046..6299
DNA (1254bp) protein (418aa)
beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=1853993 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
beta-ketoacyl synthase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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6412..7146
DNA (735bp) protein (245aa)
RNAse III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z1N1_9BACT
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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7208..8764
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YHM2_9BACT
transglutaminase domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
transglutaminase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

8766..9602
DNA (837bp) protein (279aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M210_GEODF
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9587..10507
DNA (921bp) protein (307aa)
dihydroorotate dehydrogenase 1B; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Dihydroorotate dehydrogenase id=4903757 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
dihydroorotate dehydrogenase 1B
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10573..12273
DNA (1701bp) protein (567aa)
nadE; glutamine-dependent NAD(+) synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
NH(3)-dependent NAD(+) synthetase id=1250313 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
nadE; glutamine-dependent NAD(+) synthetase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12346..12888
DNA (543bp) protein (181aa)
pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19); K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRF4_SYNAS
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12888..13919
DNA (1032bp) protein (344aa)
D-alanine-D-alanine ligase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
D-alanine-D-alanine ligase-like protein id=3454606 bin=GWC2_Deltaproteobacteria_42_51 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
D-alanine-D-alanine ligase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

13903..14391
DNA (489bp) protein (163aa)
Putative acetyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative acetyltransferase id=14426617 bin=bin1_lowGC species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
acetyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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14541..15779
DNA (1239bp) protein (413aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2)
L-lysine 2,3-aminomutase id=1870715 bin=GWB2_Proteobacteria_55_19 species=Fusobacterium ulcerans genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

15782..16786
DNA (1005bp) protein (335aa)
D-alanine-D-alanine ligase-like protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
D-alanine-D-alanine ligase-like protein id=3454609 bin=GWC2_Deltaproteobacteria_42_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
D-alanine-D-alanine ligase-like protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

17006..17308
DNA (303bp) protein (101aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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17485..18120
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG28_9DELT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

18142..19269
DNA (1128bp) protein (376aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4943419 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

19281..19973
DNA (693bp) protein (231aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ErfK/YbiS/YcfS/YnhG family protein id=24403478 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ErfK/YbiS/YcfS/YnhG family protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_23
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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20058..20732
DNA (675bp) protein (225aa)
Putative uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4943417 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_trna_1
unknown

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20796..20879
DNA (84bp)
transferRNA
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_24
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

20987..21787
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZE28_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_25
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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21857..21988
DNA (132bp) protein (44aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_26
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

22038..22808
DNA (771bp) protein (257aa)
fabI; enoyl-ACP reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
enoyl-ACP reductase (EC:1.3.1.10)
Enoyl-[acyl-carrier-protein] reductase [NADH] id=4677562 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_27
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(22824..23213)
DNA (390bp) protein (130aa)
Signal-transduction protein with CBS domain n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IN22_LEPFC
signal-transduction protein with CBS domain Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
signal-transduction protein with CBS domain
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_28
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(23221..24984)
DNA (1764bp) protein (588aa)
NADPH-dependent glutamate synthase beta chain-like oxidoreductase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
NAD(P) oxidoreductase id=2315406 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
NADPH-dependent glutamate synthase beta chain-like oxidoreductase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_1909_29
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(25011..25451)
DNA (441bp) protein (147aa)
cytochrome C class I Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein id=14426334 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
cytochrome C class I
Displaying items 1-30 of 36 in total

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