ggKbase home page

RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2..1408)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JLN1_9BACT
PBS lyase HEAT domain-containing protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PBS lyase HEAT domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1429..1866)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Leptospira weilii RepID=UPI000367BBB4
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1870..2577)
DNA (708bp) protein (236aa)
TIR-like PF08937 domain protein n=1 Tax=Leptospira alexanderi serovar Manhao 3 str. L 60 RepID=V6HU54_9LEPT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

2979..3893
DNA (915bp) protein (305aa)
integron integrase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Integron integrase id=4370430 bin=GWC2_Nitrospirae_57_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
integrase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4102..4230
DNA (129bp) protein (43aa)
PilT protein domain protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PilT protein domain protein id=2850487 bin=GWA2_Ignavibacteria-rel_35_8 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4240..4422
DNA (183bp) protein (61aa)
Putative uncharacterized protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=2850729 bin=GWA2_Ignavibacteria-rel_35_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

4876..5619
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EZ15_CLOSG
hypothetical protein; K06898 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

5675..6403
DNA (729bp) protein (243aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4952349 bin=GWC2_Deltaproteobacteria_42_51 species=Brachyspira hampsonii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6393..7385
DNA (993bp) protein (331aa)
Csp231I DNA methyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4952350 bin=GWC2_Deltaproteobacteria_42_51 species=Ostreococcus lucimarinus virus OlV1 genus=Prasinovirus taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Csp231I DNA methyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

7453..7914
DNA (462bp) protein (154aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4326321 bin=GWC2_Deltaproteobacteria_42_51 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

7914..8243
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R3J2_OWEHD
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

8246..9934
DNA (1689bp) protein (563aa)
ABC transporter; K03688 ubiquinone biosynthesis protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
2-octaprenylphenol hydroxylase id=3523193 bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ubiquinone biosynthesis protein UbiB
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9938..11092)
DNA (1155bp) protein (385aa)
acyl-CoA dehydrogenase domain-containing protein; K00257 [EC:1.3.99.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Acyl-CoA dehydrogenase domain protein id=3548101 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
acyl-CoA dehydrogenase domain-containing protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_58497_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11082..11936)
DNA (855bp) protein (285aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
Probable 3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YJ34_9DELT
Displaying 14 items

View Taxonomy