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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3..176)
DNA (174bp) protein (58aa)
Putative Universal stress protein UspA (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAS7_9BACT
putative universal stress protein UspA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
putative universal stress protein UspA
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(239..3535)
DNA (3297bp) protein (1099aa)
hypothetical protein; K13735 adhesin/invasin Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Ig-like domain-containing protein id=3624472 bin=GWC2_Nitrospirae_57_13 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3691..4056)
DNA (366bp) protein (122aa)
Putative two component response regulator n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZCQ1_9BACT
response regulator receiver protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
response regulator receiver protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4115..6022)
DNA (1908bp) protein (636aa)
Putative Histidine kinase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z0W2_9BACT
GAF sensor signal transduction histidine kinase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
GAF sensor signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6086..7591)
DNA (1506bp) protein (502aa)
glgA; glycogen synthase; K00703 starch synthase [EC:2.4.1.21] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Glycogen synthase id=2022015 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
glgA; glycogen synthase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7611..8609)
DNA (999bp) protein (333aa)
galactose-1-phosphate uridylyltransferase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Galactose-1-phosphate uridylyltransferase id=4834385 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
galactose-1-phosphate uridylyltransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

8769..9611
DNA (843bp) protein (281aa)
PAS/PAC sensor signal transduction histidine kinase Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Multi-sensor hybrid histidine kinase id=2990035 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
PAS/PAC sensor signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

9934..10140
DNA (207bp) protein (69aa)
Sec-independent protein translocase protein TatA n=1 Tax=uncultured bacterium RepID=K1YF98_9BACT
tatE; Sec-independent protein translocase TatE; K03116 sec-independent protein translocase protein TatA Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
tatE; Sec-independent protein translocase TatE
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10217..11071)
DNA (855bp) protein (285aa)
hflC; FtsH protease activity modulator HflC (EC:3.4.-.-); K04087 membrane protease subunit HflC [EC:3.4.-.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hflC; FtsH protease activity modulator HflC (EC:3.4.-.-)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036F5028
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11071..12111)
DNA (1041bp) protein (347aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
FtsH protease activity modulator HflK n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YN65_9BACT
HflK protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

12331..13539
DNA (1209bp) protein (403aa)
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
S-adenosylmethionine synthetase (EC:2.5.1.6)
Methionine adenosyltransferase id=4127420 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

13565..14755
DNA (1191bp) protein (397aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Phospholipase D/Transphosphatidylase id=4830351 bin=GWA2_Elusimicrobia_69_24 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
phospholipase D/transphosphatidylase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

14825..15367
DNA (543bp) protein (181aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein id=5801382 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

15377..16279
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Smithella sp. ME-1 RepID=V4EPK4_9DELT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

16294..16554
DNA (261bp) protein (87aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Uncharacterized protein id=4177527 bin=GWA2_Bacteroidetes_33_15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4463_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(16569..18638)
DNA (2070bp) protein (690aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035C5FEA
TolB-like biopolymer transport periplasmic beta-propeller repeat protein; K03641 TolB protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
WD40-like beta Propeller containing protein
Displaying 16 items

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