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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(1..543)
DNA (543bp) protein (181aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
2-oxoglutarate:ferredoxin oxidoreductase, gamma subunit id=4850824 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
pyruvate ferredoxin/flavodoxin oxidoreductase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(711..1580)
DNA (870bp) protein (290aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
2-oxoglutarate ferredoxin oxidoreductase, beta subunit id=1843066 bin=GWB2_Proteobacteria_55_19 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
2-oxoglutarate ferredoxin oxidoreductase subunit beta
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(1595..2731)
DNA (1137bp) protein (379aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit id=2432485 bin=GWC2_Deltaproteobacteria_55_46 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2918..3151)
DNA (234bp) protein (78aa)
Iron-sulfur cluster-binding protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein id=4169591 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
korD; 2-oxoglutarate:ferredoxin oxidoreductase, ferredoxin subunit
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3253..4122)
DNA (870bp) protein (290aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha id=2432475 bin=GWC2_Deltaproteobacteria_55_46 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
succinyl-CoA synthetase subunit alpha
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4481..4714)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q565X9_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4794..5960)
DNA (1167bp) protein (389aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Succinyl-CoA ligase [ADP-forming] subunit beta id=1843070 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
sucC; succinyl-CoA synthetase subunit beta
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_8
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6225..6509
DNA (285bp) protein (95aa)
UPF0235 protein Desku_1188 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJF2_DESK7
hypothetical protein; K09131 hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

6516..7559
DNA (1044bp) protein (348aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LW06_CLOCD
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7601..7795)
DNA (195bp) protein (65aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7846..8154)
DNA (309bp) protein (103aa)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8270..8686)
DNA (417bp) protein (139aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=NDK_GEOUR
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8782..9255)
DNA (474bp) protein (158aa)
Cell-division initiation protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHK2_THEYD
cell-division initiation protein; K04074 cell division initiation protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
cell-division initiation protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9271..9570)
DNA (300bp) protein (100aa)
YGGT family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FF26_9DELT
hypothetical protein; K02221 YggT family protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_15
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9604..10479)
DNA (876bp) protein (292aa)
proC; ProC (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
proC; ProC (EC:1.5.1.2)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003779326
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_16
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10479..11162)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7B9J6_9CLOT
pyridoxal phosphate enzyme, YggS family; K06997 Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
pyridoxal phosphate enzyme, YggS family
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_17
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(11199..11936)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000374CCB3
hypothetical protein; K03832 periplasmic protein TonB Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(12087..13907)
DNA (1821bp) protein (607aa)
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZEW7_9BACT
glucosamine--fructose-6-phosphate aminotransferase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_19
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13967..15169)
DNA (1203bp) protein (401aa)
nucleoside-diphosphate-sugar pyrophosphorylase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RifCSPlowO2_12_N
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037353D5
nucleoside-diphosphate-sugar pyrophosphorylase
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_20
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

15343..15846
DNA (504bp) protein (168aa)
copper resistance D Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
copper resistance D id=14426395 bin=bin1_lowGC species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
copper resistance D
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

15937..16893
DNA (957bp) protein (319aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Putative uncharacterized protein id=4008872 bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
cytochrome c oxidase subunit I
RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_4064_22
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

17021..17296
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3E3_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
hypothetical protein
Displaying 22 items

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