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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6007_4

Organism: Nitrospinae bacterium RIFCSPLOWO2_12_FULL_39_93

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 1639..2361

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system, ATP-binding protein LptB n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZD96_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 240.0
  • Bit_score: 328
  • Evalue 6.40e-87
ABC transporter ATP-binding protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 465
  • Evalue 6.10e-128
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 237.0
  • Bit_score: 314
  • Evalue 2.10e-83

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 723
TTGCAGATACTAAAAGCAGTAGAACTGGTAAAGACCTTCAGGGGGAGGGAGATAGTAAGGGGAGTAAATATTGAGATACAAGAGGGTGAGATTGTAGGGTTACTTGGACCAAATGGGGCAGGGAAAACAACAATATTTTACATTGTTGTGGGACTGACGAGGCCTGAAAGTGGAAATGTATTCTTAAGCAAAAGAGAGATTACCCGGCTTCCCATGTATCAAAGGGCAAGGCTGGGAATCGGTTATCTACCACAGGAACCTTCAGTATTTCGTAAACTAACGGTAGAAGAGAATATCCTGGCAATTCTGGAAACCATGTCACTTACAGGAAGAGAGAGAAAAACAAGGGCTGAGATGCTTATGGAAGAACTAAATATACTCCATGTAAAAGATACAAAGGCATATGCCCTCTCAGGAGGTGAAAGGAGAAGGGTAGAAATCTGCAGAACCCTTGTCACCTCTCCATACTTTATTTTATTAGATGAACCTTTTGCAGGGATAGACCCGATTGCTGTAATAGATATTCAAAATATTATATCGCAGTTAAAAAAAAGGGGGATAGGTATATTGATAACCGACCATAATGTCAGAGAGACGCTGGAAATTACAGACAGGGCATATATTATAAACGAAGGTGAGATTATTGATAGTGGAAGTCCTGAAGAAATAGCGAGAAGTGAAAAGGCAAGGAAATTTTATCTGGGAGAGAATTTTACCTTATAA
PROTEIN sequence
Length: 241
LQILKAVELVKTFRGREIVRGVNIEIQEGEIVGLLGPNGAGKTTIFYIVVGLTRPESGNVFLSKREITRLPMYQRARLGIGYLPQEPSVFRKLTVEENILAILETMSLTGRERKTRAEMLMEELNILHVKDTKAYALSGGERRRVEICRTLVTSPYFILLDEPFAGIDPIAVIDIQNIISQLKKRGIGILITDHNVRETLEITDRAYIINEGEIIDSGSPEEIARSEKARKFYLGENFTL*