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RIFCSPLOWO2_12_FULL_CP_39_93_rifcsplowo2_12_scaffold_6007_5

Organism: Nitrospinae bacterium RIFCSPLOWO2_12_FULL_39_93

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 11 / 38
Location: 2482..3915

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-54 factor (Sigma N) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z085_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 494.0
  • Bit_score: 478
  • Evalue 7.60e-132
rpoN; RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 477.0
  • Bit_score: 945
  • Evalue 4.00e-272
rpoN; RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 487.0
  • Bit_score: 448
  • Evalue 2.40e-123

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1434
ATGGCAAATGAGACAAAACTCACATTAAGACAGACACACAGGCTGGTAATGACCCCGATGCTGCAGCAAGCAATAAAATTATTGCCCCTCGCCCGATTTGAGCTTATCACTTTGATTAATCAGGAGATGACGGAAAACCCCTTTCTTGAAGAAGAACCTATTCAGCCAAGCGATACTGATAGTGAAAATAATGGTTCTGGTGAATATTCGGATATAGAATATGCAAAGGAGGAAAAGGGTGAAAATCAAAATCCTGTTGAAATTGACTGGGATACATTTTTTGAAGAAAATTATTATCAAGGAGTCCCCTTTGAGGATTACGCCCCTACCAGACCACCCATAGAAAATACCCTCAAACAGAAGACTTCATTAAGAGAATATTTGATATGGCAACTCAATTTATCAACAGAAGATGCAGGGTGGAAATATATAGGGGCAATCATCATTGGCAATATTGATGATGATGGGTATTTAAGAAGTACCGTTGAGGAAATTGCGCAAAATACAGGTGCAAATACCGAAACAGTAGAAAAGGTTCTGGAGCTTATTCAATCTTTTGACCCGGTAGGGGTAGGAGCGAGGGACATTAAAGAGTGTCTTATGCTTCAGATTAAAAATAAGGCACCTGCAGATTCTCTTGCTGCAGTTCTGATTGAAAAATATCTGGAAGAATTAGAAGACAGGAATTTTAAAAGAATTGCTGAGAAAATAAATATTCCCATTGAAGAACTGCTGACGGCAGTAAAGATTATAAGAGAGTTGAATCCAAACCCGGGCAATGGTTATACTTCCGCAGAAATCCAGTATATATCTCCCGATGTAATCGTTGTGAAGACTGCAGACGACTATCAGGTAGTAATTAATGATGAGGGGATACCAAGACTCAGGATAAGTCGACGTTACCACGAAATTCTGAATAGCAAAAATAAGGCAGAGGCTAAGGAATATATTGAAAATAAATTCAGGGCTGCCCTGTGGTTTATAAAGAGCATTGAACAGAGAAGACAGACCATTTATAAAGTAGCGAATAGCATTGTCAAATTTCAAAGGGAATTCCTTGATAAAGGACTCACCTATCTCAAACCTCTCATCCTCAAGGATGTGGCTTCAGATATTGGTATGCATGAATCCACGGTAAGCAGGGTTACAACAAATAAATATATGTATACCCCTATGGGGATATTTGAGTTAAAATTTTTCTTTCACAGTGGAATAGGCTCATCACAGGGAGATGCCATATCATCAATAAAAGTTAAGGAAATGCTGAAAAAAATTGTATCACAAGAGAGTTCCAGAAAACCCTTTACAGACCAACATCTTGTAAATGTCCTCAAGAATAACGGCGTAAATATAGCAAGAAGAACCATAACAAAATATCGAAAGGAAATTAAAATTCCTTCTGCTTGCAGGAGGAAAAAGAGATTTGACTATTAG
PROTEIN sequence
Length: 478
MANETKLTLRQTHRLVMTPMLQQAIKLLPLARFELITLINQEMTENPFLEEEPIQPSDTDSENNGSGEYSDIEYAKEEKGENQNPVEIDWDTFFEENYYQGVPFEDYAPTRPPIENTLKQKTSLREYLIWQLNLSTEDAGWKYIGAIIIGNIDDDGYLRSTVEEIAQNTGANTETVEKVLELIQSFDPVGVGARDIKECLMLQIKNKAPADSLAAVLIEKYLEELEDRNFKRIAEKINIPIEELLTAVKIIRELNPNPGNGYTSAEIQYISPDVIVVKTADDYQVVINDEGIPRLRISRRYHEILNSKNKAEAKEYIENKFRAALWFIKSIEQRRQTIYKVANSIVKFQREFLDKGLTYLKPLILKDVASDIGMHESTVSRVTTNKYMYTPMGIFELKFFFHSGIGSSQGDAISSIKVKEMLKKIVSQESSRKPFTDQHLVNVLKNNGVNIARRTITKYRKEIKIPSACRRKKRFDY*