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RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(78..1379)
DNA (1302bp) protein (434aa)
Electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1); K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
Electron transfer flavoprotein-quinone oxidoreductase id=4270868 bin=GWA2_Elusimicrobia_69_24 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(1394..1810)
DNA (417bp) protein (139aa)
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Response regulator receiver protein id=4270863 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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1913..2656
DNA (744bp) protein (248aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
tRNA(Ile)-lysidine synthase id=4270860 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
tRNA(Ile)-lysidine synthetase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_4
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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2793..3734
DNA (942bp) protein (314aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

3806..6490
DNA (2685bp) protein (895aa)
aconitate hydratase 1 (EC:4.2.1.3) Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase 1 n=1 Tax=Chthonomonas calidirosea T49 RepID=S0F017_9BACT
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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6590..7057
DNA (468bp) protein (156aa)
Putative transcriptional regulator, contains C-terminal CBS domains n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKX5_CHLTF
putative contains C-terminal CBS domains Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
putative contains C-terminal CBS domains
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_7
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

7077..8972
DNA (1896bp) protein (632aa)
Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FU
Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha id=1718585 bin=GWA2_Elusimicrobia_66_18 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_8
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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8932..9981
DNA (1050bp) protein (350aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR8_9BACT
thiamine pyrophosphate domain-containing TPP-binding protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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9978..10475
DNA (498bp) protein (166aa)
CBS domain containing protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_10
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

10597..10821
DNA (225bp) protein (75aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Cold-shock DNA-binding domain protein id=1942518 bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
cold-shock DNA-binding domain-containing protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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comp(10890..11549)
DNA (660bp) protein (220aa)
putative Mg transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
putative Mg transporter
Putative Mg transporter id=3525559 bin=GWA2_Elusimicrobia_66_18 species=Acinetobacter sp. ANC 3994 genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_12
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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11655..12290
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4C8AD
Putative HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
HAD superfamily hydrolase
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

12320..12856
DNA (537bp) protein (179aa)
molybdopterin biosynthesis-like protein MoeZ; K11996 adenylyltransferase and sulfurtransferase Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
glutaredoxin id=14426124 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
molybdopterin biosynthesis-like protein MoeZ
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

12869..13471
DNA (603bp) protein (201aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
Nfu/NifU-domain containing protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Nfu/NifU-domain containing protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_15
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

13497..14771
DNA (1275bp) protein (425aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
biotin carboxylase-like id=14626151 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
biotin carboxylase-like
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_16
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(14722..15369)
DNA (648bp) protein (216aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=14429820 bin=bin3_NC10 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Transporter
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_17
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

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15554..17407
DNA (1854bp) protein (618aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Uncharacterized protein id=4879272 bin=GWA2_Elusimicrobia_69_24 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_18
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

17676..18707
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=3630241 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_19
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

18800..19192
DNA (393bp) protein (131aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=3833445 bin=GWF2_OP3_43_52 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_20
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

19416..20042
DNA (627bp) protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Putative uncharacterized protein id=4165954 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_rifcsplowo2_12_scaffold_5676_21
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

20151..21011
DNA (861bp) protein (287aa)
epr; minor extracellular protease Epr (EC:3.4.21.-)
aerolysin Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Aerolysin id=3630252 bin=GWA2_Elusimicrobia_69_24 species=Sulfurovum sp. AR genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Displaying 21 items

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