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RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_1
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..346)
-----------------
DNA (345bp)
protein (115aa)
GTPase HflX n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WWW2_9ALTE
small GTP-binding protein; K03665 GTP-binding protein HflX Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hflX; GTP-binding protein hflX
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_2
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(383..628)
-----------------
DNA (246bp)
protein (82aa)
RNA-binding protein Hfq n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KW64_9GAMM
RNA chaperone Hfq Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RNA-binding protein Hfq
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(719..1651)
-----------------
DNA (933bp)
protein (311aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
tRNA dimethylallyltransferase n=1 Tax=Beggiatoa alba B18LD RepID=I3CDR8_9GAMM
tRNA delta(2)-isopentenylpyrophosphate transferase
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_4
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1665..3356)
-----------------
DNA (1692bp)
protein (564aa)
DNA mismatch repair protein MutL n=1 Tax=uncultured bacterium RepID=K1ZZ78_9BACT
mutL; DNA mismatch repair protein mutL Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
DNA mismatch repair protein
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_5
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..4853)
-----------------
DNA (1299bp)
protein (433aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase AmiC n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FJA2_9GAMM
N-acetylmuramoyl-L-alanine amidase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4969..5418)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WFZ7_PANSA
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5431..6930)
-----------------
DNA (1500bp)
protein (500aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BX80_9GAMM
carbohydrate kinase Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
carbohydrate kinase
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_17732_8
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..7374)
-----------------
DNA (435bp)
protein (145aa)
orn; oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
Oligoribonuclease n=4 Tax=Acinetobacter RepID=I4ZWQ9_9GAMM
Oligoribonuclease (3'->5' exoribonuclease)
Displaying 8 items

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