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RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_27550_5

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: 5208..5669

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 151.0
  • Bit_score: 305
  • Evalue 4.00e-80
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 142.0
  • Bit_score: 209
  • Evalue 7.80e-52
tRNA pseudouridine synthase B n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A799_ALKEH similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 142.0
  • Bit_score: 209
  • Evalue 2.80e-51

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Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGGAAATAAACAAAAAACTAAAGGACGTAATGTCCACGGTATTTTATTGCTTGATAAACCGGAAGGGATTACCTCCAACCAGGCGTTACAGCATGTCAAACACCTGTATCAGGCGCGCAAGGCCGGACATACCGGCAGTCTCGACAAGCAGGCCAGCGGAATGTTGCCCCTGTGCATGGGCGAGGCAACAAAGATTTCAGGTTATCTGCTGGATTCGGATAAATATTATCTGGCGAGATGCAAGTTGGGTATTACCACCCGTACCGGTGATGCCGAGGGTGAAATTATCGCTGAAGCACCAGTTCCGGCATTAACTAATGATGAAGTGCAGACTGTCCTGGCACAGTTCCATGGAGAAATCAGTCAGGTGCCGCCCATGTATTCGGCACTGAAACACAAAGGCCAGCGCTTATATAAACTTGCCTATCAGGGTATCGTCGTTGAACGTGAACGAGATTGA
PROTEIN sequence
Length: 154
MGNKQKTKGRNVHGILLLDKPEGITSNQALQHVKHLYQARKAGHTGSLDKQASGMLPLCMGEATKISGYLLDSDKYYLARCKLGITTRTGDAEGEIIAEAPVPALTNDEVQTVLAQFHGEISQVPPMYSALKHKGQRLYKLAYQGIVVERERD*