ggKbase home page

RIFCSPLOWO2_12_FULL_Gammaproteobacteria_47_76_rifcsplowo2_12_scaffold_27550_6

Organism: Gammaproteobacteria bacterium RIFCSPLOWO2_12_FULL_47_76

partial RP 38 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38 MC: 1
Location: 5650..6075

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 141.0
  • Bit_score: 277
  • Evalue 8.20e-72
tRNA pseudouridine synthase B n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GW71_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 137.0
  • Bit_score: 161
  • Evalue 4.70e-37
tRNA pseudouridine 55 synthase similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 137.0
  • Bit_score: 161
  • Evalue 1.30e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gammaproteobacteria_47_11 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
TTGAACGTGAACGAGATTGAAATCAGTGTGCACTGTTCCAAGGGGACGTATATCCGCACGCTGGCCGAGGACATAGGCAAAAAACTCGGTTGCGGGGCGCATGTGAAAAAACTGCGGCGGCTGGGTGCAGGGCCGTTCCGGGCTGAACAAATGATTCCTATGGCAGAAATCGAGCGTCTGGCGGTTGCAGGCACAACGGTGCTGGACCAACTGTTGCTGCCTGTCGATTCTGCGCTGCAGGGTGTGCCGGAAATACAGGCGAGTGAAAGTCTGGTCTTTTATATGCGTCAGGGGCAGGCGGTCATGGTCCCGCATGCTCCGGTTGACGGGTTGGTGCGGATCTATGATCAACAGCACCAGTTCATTGGGGTCGGCGAGGTACAGGATGATGGCAAGATATGTCCGCGCCGGCTGATCCAGAGGTAA
PROTEIN sequence
Length: 142
LNVNEIEISVHCSKGTYIRTLAEDIGKKLGCGAHVKKLRRLGAGPFRAEQMIPMAEIERLAVAGTTVLDQLLLPVDSALQGVPEIQASESLVFYMRQGQAVMVPHAPVDGLVRIYDQQHQFIGVGEVQDDGKICPRRLIQR*