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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2..202)
DNA (201bp) protein (67aa)
Formyl-CoA transferase (EC:2.8.3.16)
Bile acid-inducible operon protein F (BaiF-1) id=3742528 bin=GWC2_Methylomirabilis_70_24 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative acyl-CoA transferases/carnitine dehydratase Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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453..1667
DNA (1215bp) protein (405aa)
putative ABC-transport systems periplasmic component precursor id=3061784 bin=GWF2_Methylomirabilis_70_14 species=Burkholderia ubonensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
periplasmic binding domain protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1788..2672
DNA (885bp) protein (295aa)
ABC-type transporter, integral membrane subunit id=4382816 bin=GWC2_Methylomirabilis_70_24 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid transport system / permease component family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
High-affinity branched-chain amino acid transport system permease protein LivH
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2679..3593
DNA (915bp) protein (305aa)
Inner-membrane translocator id=4382818 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter, inner membrane protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3580..4329
DNA (750bp) protein (250aa)
sulfate-transporting ATPase (EC:3.6.3.25); K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase id=4382820 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4333..5052
DNA (720bp) protein (240aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (EC:3.6.3.17) Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (EC:3.6.3.17)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4139240 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5059..5973
DNA (915bp) protein (305aa)
Branched-chain amino acid ABC-type transport system, permease id=4139243 bin=GWF2_Methylomirabilis_70_14 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Branched-chain amino acid ABC-type transport system, permease Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid transport system / permease component family protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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6198..6869
DNA (672bp) protein (224aa)
Inner-membrane translocator id=4382863 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia glumae genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
ABC transporter, inner membrane protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6866..7555
DNA (690bp) protein (230aa)
Phosphonate-transporting ATPase id=4139249 bin=GWF2_Methylomirabilis_70_14 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Phosphonate-transporting ATPase; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7552..7914
DNA (363bp) protein (121aa)
ytkA-like family protein
hypothetical protein BuboB_22101 id=4382867 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia ubonensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein BuboB_22101 Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13811_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8140..8535
DNA (396bp) protein (132aa)
2-isopropylmalate synthase id=4382869 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pyruvate carboxyltransferase Tax=GWA2_Rokubacteria_70_23_curated
pyruvate carboxyltransferase
Displaying 11 items

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