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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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219..1739
DNA (1521bp) protein (507aa)
Kelch repeat-containing protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJB4_9BACT
Kelch repeat-containing protein {ECO:0000313|EMBL:EEF60152.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3;
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2178..2381)
DNA (204bp) protein (68aa)
id=4958124 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=CSP1_6_Rokubacteria
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2443..2742)
DNA (300bp) protein (100aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Methionine synthase (B12-independent) id=1866156 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methionine synthase, vitamin-B12 independent
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2770..2922)
DNA (153bp) protein (51aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2919..4034)
DNA (1116bp) protein (372aa)
Alcohol dehydrogenase zinc-binding domain protein id=4958123 bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alcohol dehydrogenase zinc-binding domain-containing protein Tax=CSP1_6_Rokubacteria
alcohol dehydrogenase zinc-binding domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4036..5265)
DNA (1230bp) protein (410aa)
lysC; aspartokinase (EC:2.7.2.4) Tax=CSP1_6_Rokubacteria
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase id=4958122 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5332..6003)
DNA (672bp) protein (224aa)
Uncharacterized protein id=2513764 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6005..6346)
DNA (342bp) protein (114aa)
id=2513763 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=2513763 Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6347..6841)
DNA (495bp) protein (165aa)
Putative transmembrane anti-sigma factor id=2513760 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Putative transmembrane anti-sigma factor Tax=GWA2_Rokubacteria_70_23_curated
transmembrane anti-sigma factor
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6838..7416)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor id=2513757 bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated
RNA polymerase sigma factor
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7512..7889)
DNA (378bp) protein (126aa)
hypothetical protein Magn03010940 id=2513754 bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7991..8989)
DNA (999bp) protein (333aa)
Putative uncharacterized protein id=2513752 bin=GWC2_Methylomirabilis_70_24 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein; K07027 Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8998..10056)
DNA (1059bp) protein (353aa)
thrC_2; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=GWA2_Rokubacteria_70_23_curated
thrC_2; threonine synthase (EC:4.2.3.1)
Threonine synthase id=2513750 bin=GWC2_Methylomirabilis_70_24 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11654..12853)
DNA (1200bp) protein (400aa)
class I and II aminotransferase; K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=GWA2_Rokubacteria_70_23_curated
Aminotransferase class I and II id=2513746 bin=GWC2_Methylomirabilis_70_24 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
class I and II aminotransferase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_34464_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13106..14002
DNA (897bp) protein (299aa)
Peptidase M23B id=2513744 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
yebA2; M23 peptidase domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
peptidase M23B
Displaying 16 items

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