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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..146)
DNA (144bp) protein (48aa)
acyl-CoA dehydrogenase domain-containing protein; K04117 cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-] Tax=GWC2_Rokubacteria_70_16_curated
Acyl-CoA dehydrogenase domain protein id=3805157 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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360..629
DNA (270bp) protein (90aa)
id=3805159 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3805159 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1187..1564)
DNA (378bp) protein (126aa)
Putative F420-dependent oxidoreductase id=3805161 bin=GWC2_Methylomirabilis_70_16 species=Saccharomonospora marina genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
F420-dependent oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1722..2096)
DNA (375bp) protein (125aa)
PilT protein n=1 Tax=mine drainage metagenome RepID=T1APU7_9ZZZZ
Conserved protein of unknown function with PIN domain, possible toxin Tax=GWC2_Rokubacteria_70_16_curated
Conserved protein of unknown function with PIN domain, possible toxin
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2120..2464)
DNA (345bp) protein (115aa)
Antitoxin VapB40 n=60 Tax=Mycobacterium tuberculosis complex RepID=VPB40_MYCTU
Conserved protein of unknown function, possible antitoxin Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_trna_1
unknown

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comp(2836..2910)
DNA (75bp)
transferRNA
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2982..3854)
DNA (873bp) protein (291aa)
xylose isomerase domain-containing protein TIM barrel Tax=GWC2_Rokubacteria_70_16_curated
Xylose isomerase domain-containing protein TIM barrel id=3805167 bin=GWC2_Methylomirabilis_70_16 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
xylose isomerase domain-containing protein TIM barrel
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3896..4207)
DNA (312bp) protein (104aa)
OmpA family protein id=3805170 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
OmpA family protein Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4454..4681)
DNA (228bp) protein (76aa)
Uncharacterized protein id=3805173 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Uncharacterized protein Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_9
CSP1_5_NC10, NC10, Bacteria

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comp(4672..5466)
DNA (795bp) protein (265aa)
response regulator in two-component regulatory system, sigma 54-dependent id=14428704 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator in two-component regulatory system, sigma 54-dependent Tax=CSP1_5_NC10
two component sigma-54 specific Fis family transcriptional regulator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_23585_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5536..6213
DNA (678bp) protein (226aa)
Amidase id=3805175 bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase Tax=GWC2_Rokubacteria_70_16_curated
amidase
Displaying 11 items

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