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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..315)
DNA (315bp) protein (105aa)
Extracellular ligand-binding receptor id=3298093 bin=GWF2_Methylomirabilis_70_14 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(338..1051)
DNA (714bp) protein (238aa)
Probable high-affinity branched-chain amino acid transport ATP-binding protein id=3298091 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braG; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
braG; high-affinity branched-chain amino acid transport ATP-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1038..1763)
DNA (726bp) protein (242aa)
LivG-like protein id=4770223 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
LivG-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
LivG-like protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1780..2205)
DNA (426bp) protein (142aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=GWA2_Rokubacteria_70_23_curated
Cobalamin B12-binding domain protein id=4770224 bin=GWC2_Methylomirabilis_70_24 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cobalamin B12-binding domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2205..3224)
DNA (1020bp) protein (340aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) Tax=GWA2_Rokubacteria_70_23_curated
NAD dependent epimerase/dehydratase family protein id=4770226 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UDP-glucose 4-epimerase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3317..4075)
DNA (759bp) protein (253aa)
dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWA2_Rokubacteria_70_23_curated
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase id=4770227 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium phlei genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4081..6054)
DNA (1974bp) protein (658aa)
2,4-dienoyl-CoA reductase (NADPH) id=4770228 bin=GWC2_Methylomirabilis_70_24 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
NADH:flavin oxidoreductase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6059..7867)
DNA (1809bp) protein (603aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) id=4770229 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
5-oxoprolinase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7864..9900)
DNA (2037bp) protein (679aa)
hyuA; hydantoin utilization protein A; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
hyuA; hydantoin utilization protein A (EC:3.5.2.9)
Hydantoin utilization protein A id=4770257 bin=GWC2_Methylomirabilis_70_24 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9921..10628)
DNA (708bp) protein (236aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC-type branched-chain amino acid transport system, ATPase component id=3298066 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10615..11382)
DNA (768bp) protein (256aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3298063 bin=GWF2_Methylomirabilis_70_14 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11388..12422)
DNA (1035bp) protein (345aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator id=4770260 bin=GWC2_Methylomirabilis_70_24 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_27649_13
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(12424..12738)
DNA (315bp) protein (105aa)
ABC transporter, permease protein id=4770261 bin=GWC2_Methylomirabilis_70_24 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease
Tax=BJP_IG2069_Anaerolineales_43_63
Displaying 13 items

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