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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..288)
DNA (288bp) protein (96aa)
Glutamine synthetase id=4828257 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glnA; glutamine synthetase Tax=GWA2_Rokubacteria_70_23_curated
glutamine synthetase, type I
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(506..1765)
DNA (1260bp) protein (420aa)
Ammonium transport protein (Amt family) id=4828258 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amtB; ammonium transport protein Tax=GWC2_Rokubacteria_70_16_curated
amtB; ammonium transport protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2053..2391)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II id=4828259 bin=GWC2_Methylomirabilis_70_16 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1 Tax=GWC2_Rokubacteria_70_16_curated
nitrogen regulatory protein PII
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2560..2955)
DNA (396bp) protein (132aa)
Response regulator receiver domain-containing protein id=4828260 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator of RpoS; K02485 two-component system, unclassified family, response regulator Tax=GWC2_Rokubacteria_70_16_curated
response regulator of RpoS
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3146..4504)
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4828261 bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
zraR; transcriptional regulatory protein ZraR Tax=GWC2_Rokubacteria_70_16_curated
zraR; transcriptional regulatory protein ZraR
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4741..5175
DNA (435bp) protein (145aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=4828262 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein Tax=GWC2_Rokubacteria_70_16_curated
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5172..6359
DNA (1188bp) protein (396aa)
cofG; FO synthase subunit 1; K11779 FO synthase [EC:2.5.1.-] Tax=GWC2_Rokubacteria_70_16_curated
FO synthase subunit 1 id=4828263 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cofG; FO synthase subunit 1
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6376..7647
DNA (1272bp) protein (424aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-) Tax=GWC2_Rokubacteria_70_16_curated
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 id=4828264 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7800..8087
DNA (288bp) protein (96aa)
Transcriptional dual regulator HU-beta id=4828265 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hupB; transcriptional dual regulator HU-beta; K03530 DNA-binding protein HU-beta Tax=GWC2_Rokubacteria_70_16_curated
hupB; transcriptional dual regulator HU-beta
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8074..8571
DNA (498bp) protein (166aa)
id=4828293 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4828293 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8573..9499
DNA (927bp) protein (309aa)
2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=GWC2_Rokubacteria_70_16_curated
2-phospho-L-lactate transferase (EC:2.7.1.-)
2-phospho-L-lactate transferase id=4828294 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9496..10173
DNA (678bp) protein (226aa)
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] Tax=GWC2_Rokubacteria_70_16_curated
2-phospho-L-lactate guanylyltransferase id=4828295 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2-phospho-L-lactate guanylyltransferase CofC
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_21738_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10493..11176
DNA (684bp) protein (228aa)
cofE; F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=GWC2_Rokubacteria_70_16_curated
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
Coenzyme F420-0 gamma-glutamyl ligase id=4828296 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Displaying 13 items

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