ggKbase home page

RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681

Search features with annotation key words

Displaying 9 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(83..862)
DNA (780bp) protein (260aa)
Short chain dehydrogenase protein id=2937741 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobiaceae bacterium SG-6C genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short chain dehydrogenase Tax=GWC2_Rokubacteria_70_16_curated
short chain dehydrogenase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1022..1369)
DNA (348bp) protein (116aa)
COG0251: Putative translation initiation inhibitor, yjgF family id=2937744 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1394..2257)
DNA (864bp) protein (288aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=GWA2_Rokubacteria_70_23_curated
NUDIX hydrolase id=2642971 bin=GWF2_Methylomirabilis_70_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nudC; NADH pyrophosphatase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2254..2865)
DNA (612bp) protein (204aa)
3-isopropylmalate dehydratase small subunit id=2937751 bin=GWC2_Methylomirabilis_70_16 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-isopropylmalate dehydratase small subunit Tax=GWC2_Rokubacteria_70_16_curated
3-isopropylmalate dehydratase small subunit
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2867..4321)
DNA (1455bp) protein (485aa)
leuC; alpha-IPM isomerase; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWC2_Rokubacteria_70_16_curated
3-isopropylmalate dehydratase large subunit id=2937753 bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
leuC; alpha-IPM isomerase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4492..5943
DNA (1452bp) protein (484aa)
aminopeptidase P (EC:3.4.11.9) Tax=GWC2_Rokubacteria_70_16_curated
aminopeptidase P (EC:3.4.11.9)
Peptidase M24 id=2937755 bin=GWC2_Methylomirabilis_70_16 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5956..6810)
DNA (855bp) protein (285aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=GWC2_Rokubacteria_70_16_curated
Sulfurtransferase id=2937757 bin=GWC2_Methylomirabilis_70_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rhodanese domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6817..8001)
DNA (1185bp) protein (395aa)
Probable thiolase id=2937759 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA acetyltransferase Tax=GWC2_Rokubacteria_70_16_curated
acetyl-CoA acetyltransferase rbh
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_13681_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8015..8560)
DNA (546bp) protein (182aa)
Pyrophosphate-energized proton pump id=2937761 bin=GWC2_Methylomirabilis_70_16 species=Austwickia chelonae genus=Austwickia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
potassium transporter Tax=GWC2_Rokubacteria_70_16_curated
membrane-bound proton-translocating pyrophosphatase
Displaying 9 items

View Taxonomy