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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..608
DNA (606bp) protein (202aa)
hypothetical protein; K06966 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Possible lysine decarboxylase family id=4476360 bin=GWF2_Methylomirabilis_70_14 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein of unknown function TIGR00730
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(611..817)
DNA (207bp) protein (69aa)
id=4476363 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4476363 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

832..2274
DNA (1443bp) protein (481aa)
nadE; NAD(+) synthase (glutamine-hydrolyzing) (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=GWC2_Rokubacteria_70_16_curated
nadE; glutamine-dependent NAD+ synthetase (EC:6.3.5.1)
NAD(+) synthase (Glutamine-hydrolyzing) id=4759439 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2385..2573
DNA (189bp) protein (63aa)
nadE; NAD(+) synthase (glutamine-hydrolyzing) (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=GWC2_Rokubacteria_70_16_curated
NAD(+) synthase (Glutamine-hydrolyzing) id=4759439 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD synthase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2629..4386)
DNA (1758bp) protein (586aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Rokubacteria_70_16_curated
Lipid A export ATP-binding/permease protein MsbA id=4759438 bin=GWC2_Methylomirabilis_70_16 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phospholipid-lipopolysaccharide ABC transporter
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4383..5393)
DNA (1011bp) protein (337aa)
Glycosyl transferase, group 1 id=4759437 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
group 1 glycosyl transferase Tax=GWC2_Rokubacteria_70_16_curated
group 1 glycosyl transferase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5498..6577)
DNA (1080bp) protein (360aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=GWC2_Rokubacteria_70_16_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase id=4334275 bin=GWF2_Methylomirabilis_70_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6577..7086)
DNA (510bp) protein (170aa)
Flavin reductase domain protein FMN-binding id=4759407 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
flavin reductase domain-containing FMN-binding protein Tax=GWC2_Rokubacteria_70_16_curated
flavin reductase domain-containing FMN-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7215..8324
DNA (1110bp) protein (370aa)
Mrp id=4759406 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8360..9067
DNA (708bp) protein (236aa)
protease Do; K01362 [EC:3.4.21.-] Tax=GWC2_Rokubacteria_70_16_curated
Protease Do id=4759405 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative serine protease
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9179..9343
DNA (165bp) protein (55aa)
Putative regulatory protein, FmdB family id=4759404 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9360..9887
DNA (528bp) protein (176aa)
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-] Tax=GWC2_Rokubacteria_70_16_curated
Intracellular protease, PfpI family id=4759403 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Pfpi family intracellular protease
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_15113_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9884..10357
DNA (474bp) protein (158aa)
Carbamoyl transferase id=4759402 bin=GWC2_Methylomirabilis_70_16 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative carbamoyl transferase, NodU family Tax=GWC2_Rokubacteria_70_16_curated
carbamoyl transferase, NodU family
Displaying 13 items

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