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RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3..2288)
DNA (2286bp) protein (762aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=GWC2_Rokubacteria_70_16_curated
Multi-sensor signal transduction histidine kinase id=3068368 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative two-component sensor histidine kinase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2571..2780)
DNA (210bp) protein (70aa)
ATPase (AAA+ superfamily)-like protein; K07133 Tax=GWC2_Rokubacteria_70_16_curated
ATPase (AAA+ superfamily)-like protein id=3068371 bin=GWC2_Methylomirabilis_70_16 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATPase (AAA+ superfamily)-like protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2774..3934)
DNA (1161bp) protein (387aa)
Histidine kinase (EC:2.7.13.3) Tax=GWC2_Rokubacteria_70_16_curated
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase id=3068373 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3931..5880)
DNA (1950bp) protein (650aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=GWC2_Rokubacteria_70_16_curated
Multi-sensor hybrid histidine kinase id=3068375 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response receiver sensor histidine kinase response regulator, PAS domain-containing
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5870..7369)
DNA (1500bp) protein (500aa)
Response regulator receiver id=3068376 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
histidine kinase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7366..7812)
DNA (447bp) protein (149aa)
Response regulator receiver protein id=3068377 bin=GWC2_Methylomirabilis_70_16 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
response regulator receiver protein Tax=GWC2_Rokubacteria_70_16_curated
response regulator receiver protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7802..10171)
DNA (2370bp) protein (790aa)
Putative Histidine kinase id=3068378 bin=GWC2_Methylomirabilis_70_16 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
multi-sensor signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10171..11181)
DNA (1011bp) protein (337aa)
NMT1/THI5 like domain protein id=3068379 bin=GWC2_Methylomirabilis_70_16 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
NMT1/THI5 like domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11208..11654)
DNA (447bp) protein (149aa)
Response regulator receiver protein id=3068380 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component LuxR family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
two component LuxR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11834..12103)
DNA (270bp) protein (90aa)
PilT protein-like id=3068381 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
conserved hypothetical protein; putative PIN domain Tax=GWC2_Rokubacteria_70_16_curated
twitching motility protein PilT
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12199..12408)
DNA (210bp) protein (70aa)
Transcriptional regulator, AbrB family id=3068382 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative Transcriptional regulator AbrB Tax=GWC2_Rokubacteria_70_16_curated
putative Transcriptional regulator AbrB
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12521..12610)
DNA (90bp) protein (30aa)
LuxR family two component response regulator protein id=3068383 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LuxR family two component response regulator protein Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12892..13125
DNA (234bp) protein (78aa)
Toxin-antitoxin system, antitoxin component, HicB family id=3068384 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Toxin-antitoxin system, antitoxin component, HicB family Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13420..13629
DNA (210bp) protein (70aa)
id=3068385 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3068385 Tax=GWC2_Rokubacteria_70_16_curated
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14071..14634)
DNA (564bp) protein (188aa)
Two component transcriptional regulator, LuxR family id=3068386 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component LuxR family transcriptional regulator Tax=RBG_16_Actinobacteria_67_10_curated
two component LuxR family transcriptional regulator
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14721..19952)
DNA (5232bp) protein (1744aa)
Multi-sensor signal transduction histidine kinase id=3068387 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS domain-containing protein Tax=GWC2_Rokubacteria_70_16_curated
PAS domain-containing protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19961..20806)
DNA (846bp) protein (282aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein id=3068388 bin=GWC2_Methylomirabilis_70_16 species=Marinobacter adhaerens genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
phosphonate ABC transporter periplasmic phosphonate-binding protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21018..21374
DNA (357bp) protein (119aa)
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Putative uncharacterized protein id=3068389 bin=GWC2_Methylomirabilis_70_16 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_Methylomirabilis_71_19_rifcsplowo2_12_scaffold_18511_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21367..21540
DNA (174bp) protein (58aa)
Putative uncharacterized protein id=3068390 bin=GWC2_Methylomirabilis_70_16 species=Thermococcus kodakarensis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
Displaying 19 items

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