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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1..495)
-----------------
DNA (495bp)
protein (165aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] id=14625709 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] Tax=CSP1_6_Rokubacteria
scoB2; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (Succinyl CoA:3-oxoacid CoA-transferase) (OXCT B) (EC:2.8.3.5)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(555..1226)
-----------------
DNA (672bp)
protein (224aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] id=14625710 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] Tax=CSP1_6_Rokubacteria
3-oxoacid CoA-transferase subunit A
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1231..2235)
-----------------
DNA (1005bp)
protein (335aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein id=14625711 bin=bin7_NC10_sister species=Xanthobacter autotrophicus genus=Xanthobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 3 extracellular solute-binding protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2274..3011)
-----------------
DNA (738bp)
protein (246aa)
ABC transporter related id=14625712 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ABC transporter related Tax=CSP1_6_Rokubacteria
ABC transporter related
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3020..3880)
-----------------
DNA (861bp)
protein (287aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component id=14625713 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tax=CSP1_6_Rokubacteria
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3892..5310)
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein id=14625714 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(5307..6128)
-----------------
DNA (822bp)
protein (274aa)
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625715 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
gluconate 5-dehydrogenase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(6139..6675)
-----------------
DNA (537bp)
protein (179aa)
biotin carboxyl carrier protein id=14625716 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
biotin carboxyl carrier protein Tax=CSP1_6_Rokubacteria
biotin carboxyl carrier protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6685..7461)
-----------------
DNA (777bp)
protein (259aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] id=14625717 bin=bin7_NC10_sister species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=CSP1_6_Rokubacteria
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_15966_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7458..8333)
-----------------
DNA (876bp)
protein (292aa)
siaT; TRAP transporter, 4TM/12TM fusion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP transporter, 4TM/12TM fusion protein id=14625718 bin=bin7_NC10_sister species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TRAP transporter, 4TM/12TM fusion protein
Displaying 10 items

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