ggKbase home page

RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(218..1345)
DNA (1128bp) protein (376aa)
ABC transporter permease id=14625062 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease Tax=CSP1_6_Rokubacteria
ABC transporter permease
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1468..2412)
DNA (945bp) protein (315aa)
ABC transporter ATP-binding protein (EC:3.6.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter ATP-binding protein (EC:3.6.3.-) id=14625063 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein (EC:3.6.3.-)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2514..3674)
DNA (1161bp) protein (387aa)
secretion protein HlyD; K01993 HlyD family secretion protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
secretion protein HlyD; K01993 HlyD family secretion protein id=14625064 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
secretion protein HlyD
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3679..4902)
DNA (1224bp) protein (408aa)
Zn-dependent protease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Zn-dependent protease id=14625065 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Zn-dependent protease
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5016..6221)
DNA (1206bp) protein (402aa)
gudP; major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
gudP; major facilitator superfamily protein id=14625066 bin=bin7_NC10_sister species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gudP; major facilitator superfamily protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6283..7341
DNA (1059bp) protein (353aa)
serine protease Do id=14625067 bin=bin7_NC10_sister species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin7_NC10_sister organism_group=NC10
serine protease Do Tax=CSP1_6_Rokubacteria
serine protease Do
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

7342..8202
DNA (861bp) protein (287aa)
branched-chain amino acid ABC superfamily ATP binding cassette transporter; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
branched-chain amino acid ABC superfamily ATP binding cassette transporter; K01997 branched-chain amino acid transport system permease protein id=14625068 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
branched-chain amino acid ABC superfamily ATP binding cassette transporter
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

8199..9083
DNA (885bp) protein (295aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625069 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(9146..9970)
DNA (825bp) protein (275aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02034 peptide/nickel transport system permease protein id=14625070 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9999..10985)
DNA (987bp) protein (329aa)
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein id=14625071 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24); K02033 peptide/nickel transport system permease protein Tax=CSP1_6_Rokubacteria
binding-protein-dependent transport system inner membrane protein (EC:3.6.3.24)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_16262_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11067..12572)
DNA (1506bp) protein (502aa)
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein id=14625072 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
family 5 extracellular solute-binding protein (EC:3.1.3.26); K02035 peptide/nickel transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
family 5 extracellular solute-binding protein (EC:3.1.3.26)
Displaying 12 items

View Taxonomy