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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2..181
DNA (180bp) protein (60aa)
tRNA-dihydrouridine synthase id=3938344 bin=GWF2_Methylomirabilis_70_14 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA-U20-dihydrouridine synthase Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(115..237)
DNA (123bp) protein (41aa)
alanine racemase domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_3
unknown

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comp(257..397)
DNA (141bp) protein (47aa)

This feature has no annotations

RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_4
CSP1_5_NC10, NC10, Bacteria

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comp(397..864)
DNA (468bp) protein (156aa)
cbs domain id=14430981 bin=bin3_NC10 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
cbs domain Tax=CSP1_5_NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1115..1939)
DNA (825bp) protein (275aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Adenylate kinase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6YZX9_DESAT
adenylate kinase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_6
CSP1_5_NC10, NC10, Bacteria

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comp(1982..2254)
DNA (273bp) protein (91aa)
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=CSP1_5_NC10
cbbT; transketolase (TK) (EC:2.2.1.1) id=14430978 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
transketolase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_7
CSP1_5_NC10, NC10, Bacteria

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comp(2511..3989)
DNA (1479bp) protein (493aa)
cbbT; transketolase (TK) (EC:2.2.1.1) id=14430978 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cbbT; transketolase (TK) (EC:2.2.1.1) Tax=CSP1_5_NC10
transketolase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_8
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4071..4520)
DNA (450bp) protein (150aa)
CBS domain containing membrane protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L5B8_MAGSM
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(4549..5493)
DNA (945bp) protein (315aa)
udk; phosphoribulokinase; K00855 phosphoribulokinase [EC:2.7.1.19] Tax=RBG_16_Chloroflexi_63_12_curated
Phosphoribulokinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGS4_9CHLR
udk; phosphoribulokinase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_10
CSP1_5_NC10, NC10, Bacteria

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comp(5490..6449)
DNA (960bp) protein (320aa)
CbbX-like protein, containing AAA-ATPase domain id=14430973 bin=bin3_NC10 species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
CbbX-like protein, containing AAA-ATPase domain Tax=CSP1_5_NC10
CbbX protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_11
CSP1_5_NC10, NC10, Bacteria

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comp(6477..6920)
DNA (444bp) protein (148aa)
cbbS; ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC:4.1.1.39) id=14430974 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cbbS; ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC:4.1.1.39) Tax=CSP1_5_NC10
cbbS; ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) (EC:4.1.1.39)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_12
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(6933..8381)
DNA (1449bp) protein (483aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000313|EMBL:KJF18383.1}; EC=4.1.1.39 {ECO:0000313|EMBL:KJF18383.1};; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobial
ribulose-bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1B7_NITHN
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_13
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8393..9076)
DNA (684bp) protein (228aa)
tal; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacte
Probable transaldolase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAC4_AMMDK
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

9227..10201
DNA (975bp) protein (325aa)
RuBisCO operon transcriptional regulator id=14430982 bin=bin3_NC10 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
RuBisCO operon transcriptional regulator Tax=CSP1_5_NC10
LysR family transcriptional regulator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_14732_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(10176..10427)
DNA (252bp) protein (84aa)
thiol-disulfide isomerase-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative thiol-disulfide oxidoreductase id=14627055 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Displaying 15 items

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