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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..2208)
DNA (2208bp) protein (736aa)
infB; translation initiation factor IF-2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=14625415 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
infB; translation initiation factor IF-2
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2217..2465)
DNA (249bp) protein (83aa)
hypothetical protein; K07742 hypothetical protein id=14625414 bin=bin7_NC10_sister species=Selenomonas sp. oral taxon 138 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K07742 hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2462..3850)
DNA (1389bp) protein (463aa)
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor) id=14625413 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor) Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3847..4389)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625412 bin=bin7_NC10_sister species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ribosome maturation factor RimP
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(4408..6102)
DNA (1695bp) protein (565aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) id=14625411 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6107..6445)
DNA (339bp) protein (113aa)
ferredoxin Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ferredoxin id=14625410 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
ferredoxin
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6450..7544)
DNA (1095bp) protein (365aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) id=14625409 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7555..8910)
DNA (1356bp) protein (452aa)
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] id=14625408 bin=bin7_NC10_sister species=Thioalkalivibrio sp. ALJ24 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rseP; regulator of sigma E protease (EC:3.4.24.-)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8929..10110)
DNA (1182bp) protein (394aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] id=14625407 bin=bin7_NC10_sister species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=CSP1_6_Rokubacteria
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_9491_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10118..10606)
DNA (489bp) protein (163aa)
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41) id=14625406 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41)
Displaying 10 items

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