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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1..342)
DNA (342bp) protein (114aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=14627006 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
protein-export membrane protein SecF
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(347..1966)
DNA (1620bp) protein (540aa)
protein translocase subunit; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
protein translocase subunit; K03072 preprotein translocase subunit SecD id=14627005 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protein translocase subunit
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1975..2319)
DNA (345bp) protein (115aa)
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=14627004 bin=bin7_NC10_sister species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin7_NC10_sister organism_group=NC10
yajC; preprotein translocase subunit YajC
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2321..3469)
DNA (1149bp) protein (383aa)
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) id=14627003 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3608..4645)
DNA (1038bp) protein (346aa)
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=14627002 bin=bin7_NC10_sister species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4791..6128)
DNA (1338bp) protein (446aa)
Tfp pilus assembly protein PilF id=14627001 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
Tfp pilus assembly protein PilF Tax=CSP1_6_Rokubacteria
Tfp pilus assembly protein PilF
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6140..6634)
DNA (495bp) protein (165aa)
id=14627000 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=14627000 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6834..7163)
DNA (330bp) protein (110aa)
protein secretion chaperonine; K06878 tRNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
protein secretion chaperonine; K06878 tRNA-binding protein id=14626999 bin=bin7_NC10_sister species=Coprothermobacter platensis genus=Coprothermobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_52434_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(7160..7267)
DNA (108bp) protein (36aa)
stage II sporulation-like protein; K06381 stage II sporulation protein D id=14626998 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
SpoIID/LytB domain protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 9 items

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