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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)
htxC; phosphite transport system permease protein htxC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative phosphite transport system permease protein htxC id=3666480 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
htxC; phosphite transport system permease protein htxC
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(403..1215)
DNA (813bp) protein (271aa)
phnC; phosphonates import ATP-binding protein phnC (ABC superfamily, atp_bind) (EC:3.6.3.28) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phnC; phosphonates import ATP-binding protein phnC (ABC superfamily, atp_bind) (EC:3.6.3.28)
Phosphonates import ATP-binding protein phnC (ABC superfamily, atp_bind) id=3666479 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1218..2078)
DNA (861bp) protein (287aa)
ABC phosphonate-binding periplasmic protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC phosphonate-binding periplasmic protein id=3666478 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC phosphonate-binding periplasmic protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2368..3360)
DNA (993bp) protein (331aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] id=14626581 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
selenide, water dikinase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3586..4479)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
LysR family transcriptional regulator id=14626582 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
LysR family transcriptional regulator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4545..4754)
DNA (210bp) protein (70aa)
FmdB family regulatory protein id=14626583 bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FmdB family regulatory protein Tax=CSP1_6_Rokubacteria
FmdB family regulatory protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(4759..4956)
DNA (198bp) protein (66aa)
hypothetical protein id=14626584 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(4998..5549)
DNA (552bp) protein (184aa)
dcd; Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC:3.5.4.13) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dcd; Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC:3.5.4.13) id=14626585 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
dcd; Deoxycytidine triphosphate deaminase (dCTP deaminase) (EC:3.5.4.13)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5609..5932)
DNA (324bp) protein (108aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14626586 bin=bin7_NC10_sister species=Selenomonas sp. CM52 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6193..7074)
DNA (882bp) protein (294aa)
Homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] id=14626587 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Homoserine kinase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7098..7841)
DNA (744bp) protein (248aa)
ccdA; cytochrome c biogenesis protein CcdA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ccdA; cytochrome c biogenesis protein CcdA id=14626588 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccdA; cytochrome c biogenesis protein CcdA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7855..8430)
DNA (576bp) protein (192aa)
resA; thiol-disulfide oxidoreductase resA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
resA; thiol-disulfide oxidoreductase resA id=14626589 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
resA; thiol-disulfide oxidoreductase resA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8490..9290)
DNA (801bp) protein (267aa)
transmembrane transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transmembrane transcriptional regulator id=14626590 bin=bin7_NC10_sister species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative transmembrane protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9287..9853)
DNA (567bp) protein (189aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626591 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
ECF subfamily RNA polymerase sigma-24 factor
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30695_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

9949..10728
DNA (780bp) protein (260aa)
leuB2; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] id=14626592 bin=bin7_NC10_sister species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
leuB2; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=CSP1_6_Rokubacteria
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
Displaying 15 items

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