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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1..555
-----------------
DNA (555bp)
protein (185aa)
id=14625084 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625084 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

724..1104
-----------------
DNA (381bp)
protein (127aa)
id=14625083 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14625083 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1101..1292
-----------------
DNA (192bp)
protein (64aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1464..1823
-----------------
DNA (360bp)
protein (120aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RNP-1 like RNA-binding protein id=14625082 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RNP-1 like RNA-binding protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1911..3761)
-----------------
DNA (1851bp)
protein (617aa)
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein id=14625081 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3868..4050
-----------------
DNA (183bp)
protein (61aa)
id=14625080 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4091..5518
-----------------
DNA (1428bp)
protein (476aa)
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] id=14625079 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=CSP1_6_Rokubacteria
malate dehydrogenase (EC:1.1.1.38)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5537..6373
-----------------
DNA (837bp)
protein (279aa)
id=5080142 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=5080142 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6393..6686
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein id=14625078 bin=bin7_NC10_sister species=Lutibaculum baratangense genus=Lutibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

6888..7295
-----------------
DNA (408bp)
protein (136aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
TraR/DksA family transcriptional regulator id=14625077 bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
TraR/DksA family transcriptional regulator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

7379..8011
-----------------
DNA (633bp)
protein (211aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] id=14625076 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(8008..8127)
-----------------
DNA (120bp)
protein (40aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_48942_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8124..8402)
-----------------
DNA (279bp)
protein (93aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] id=14625075 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=CSP1_6_Rokubacteria
threonine dehydratase
Displaying 13 items

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