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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)
Pm20d; peptidase M20 domain-containing protein 2 (Aminoacylase 1-like protein 2) id=14627696 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(204..599)
DNA (396bp) protein (132aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627695 bin=bin7_NC10_sister species=Ahrensia kielensis genus=Ahrensia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(743..1609)
DNA (867bp) protein (289aa)
DMT family permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DMT family permease id=14627694 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
DMT family permease
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1620..2507)
DNA (888bp) protein (296aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=14627693 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2512..3681)
DNA (1170bp) protein (390aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
amidohydrolase id=14627692 bin=bin7_NC10_sister species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
amidohydrolase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3972..4328
DNA (357bp) protein (119aa)
signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
signal transduction histidine kinase id=14627691 bin=bin7_NC10_sister species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
signal transduction histidine kinase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4434..5489)
DNA (1056bp) protein (352aa)
adenylate/guanylate cyclase id=14627690 bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate/guanylate cyclase Tax=CSP1_6_Rokubacteria
adenylate/guanylate cyclase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5486..6346)
DNA (861bp) protein (287aa)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23 4.1.3.-)
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative isocitrate lyase-family protein, Putative carboxyvinyl-carboxyphosphonate phosphorylmutase id=14627689 bin=bin7_NC10_sister species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6343..7497)
DNA (1155bp) protein (385aa)
Ste24 endopeptidase; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=GWC2_Rokubacteria_70_16_curated
Ste24 endopeptidase id=4232679 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Ste24 endopeptidase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7494..7817)
DNA (324bp) protein (108aa)
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator receiver protein id=14625231 bin=bin7_NC10_sister species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7913..8827
DNA (915bp) protein (305aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATPase associated with various cellular activities AAA_5 id=4232681 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATPase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8832..9389
DNA (558bp) protein (186aa)
id=4232683 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=4232683 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9578..10987
DNA (1410bp) protein (470aa)
hypothetical protein; K07161 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Carbon monoxide dehydrogenase E protein id=4232684 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11058..11585)
DNA (528bp) protein (176aa)
Uncharacterized protein id=3110268 bin=GWF2_Methylomirabilis_70_14 species=Thermoplasmatales archaeon SCGC AB-539-N05 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11806..12378
DNA (573bp) protein (191aa)
OmpA/MotB domain protein id=1746151 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
OmpA/MotB domain-containing protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12500..13573
DNA (1074bp) protein (358aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein MkanA1_05815 id=2589429 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase domain-containing protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13586..13873
DNA (288bp) protein (96aa)
Selenoprotein id=3285643 bin=GWC2_Methylomirabilis_70_24 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenoprotein Tax=GWA2_Rokubacteria_70_23_curated
selenoprotein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_29985_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13895..14032
DNA (138bp) protein (46aa)
Putative uncharacterized protein id=4602165 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
selenoprotein Tax=GWA2_Rokubacteria_70_23_curated
Displaying 18 items

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