ggKbase home page

RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2..565)
DNA (564bp) protein (188aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] id=14625252 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=CSP1_6_Rokubacteria
phosphomethylpyrimidine kinase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(597..1295)
DNA (699bp) protein (233aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=14625253 bin=bin7_NC10_sister species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=CSP1_6_Rokubacteria
uroporphyrin-III C/tetrapyrrole methyltransferase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1377..2624)
DNA (1248bp) protein (416aa)
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92) id=14625254 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
clpX; ATP-dependent Clp protease ATP-binding subunit clpX (EC:3.4.21.92)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2634..3272)
DNA (639bp) protein (213aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=14625255 bin=bin7_NC10_sister species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3305..4573)
DNA (1269bp) protein (423aa)
tig; trigger factor (EC:5.2.1.8); K03545 trigger factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tig; trigger factor (EC:5.2.1.8)
trigger factor; K03545 trigger factor id=14625256 bin=bin7_NC10_sister species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4644..5072)
DNA (429bp) protein (143aa)
id=14625257 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625257 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_trna_4
unknown

Not on your lists

comp(5224..5309)
DNA (86bp)
transferRNA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_trna_3
unknown

Not on your lists

comp(5323..5395)
DNA (73bp)
transferRNA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_trna_2
unknown

Not on your lists

comp(5411..5484)
DNA (74bp)
transferRNA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_69289_trna_1
unknown

Not on your lists

comp(5524..5597)
DNA (74bp)
transferRNA
Displaying 10 items

View Taxonomy