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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2..337)
DNA (336bp) protein (112aa)
metal dependent phosphohydrolase id=14625376 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
metal dependent phosphohydrolase Tax=CSP1_6_Rokubacteria
metal dependent phosphohydrolase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(347..529)
DNA (183bp) protein (61aa)
excisionase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
excisionase id=14625375 bin=bin7_NC10_sister species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(595..1266)
DNA (672bp) protein (224aa)
cysE; serine acetyltransferase (EC:2.3.1.30) id=14625374 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cysE; serine acetyltransferase (EC:2.3.1.30) Tax=CSP1_6_Rokubacteria
cysE; serine acetyltransferase (EC:2.3.1.30)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1259..1663)
DNA (405bp) protein (135aa)
NifU domain-containing protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nifU; FeS cluster assembly scaffold protein NifU; K04488 nitrogen fixation protein NifU and related proteins id=14625373 bin=bin7_NC10_sister species=Oscillibacter sp. 1-3 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
NifU domain-containing protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1660..2817)
DNA (1158bp) protein (386aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] id=14625372 bin=bin7_NC10_sister species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cysteine desulfurase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2897..3220
DNA (324bp) protein (108aa)
hypothetical protein id=14625371 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3231..3590
DNA (360bp) protein (120aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625370 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3590..3817
DNA (228bp) protein (76aa)
id=14625369 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625369 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3874..4080)
DNA (207bp) protein (69aa)
hypothetical protein id=14625368 bin=bin7_NC10_sister species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4102..4455)
DNA (354bp) protein (118aa)
fdxB; 2Fe-2S ferredoxin; K04755 ferredoxin, 2Fe-2S id=14625367 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
fdxB; 2Fe-2S ferredoxin; K04755 ferredoxin, 2Fe-2S Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fdxB; 2Fe-2S ferredoxin
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4452..6290)
DNA (1839bp) protein (613aa)
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK id=14625366 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hscA; chaperone protein HscA; K04043 molecular chaperone DnaK Tax=CSP1_6_Rokubacteria
hscA; chaperone protein HscA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6268..7002)
DNA (735bp) protein (245aa)
hscB; co-chaperone protein HscB; K04082 molecular chaperone HscB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hscB; co-chaperone protein HscB; K04082 molecular chaperone HscB id=14625365 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hscB; co-chaperone protein HscB
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(7099..7425)
DNA (327bp) protein (109aa)
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein id=14625364 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
iscA; iron-sulfur cluster assembly protein IscA
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(7461..7877)
DNA (417bp) protein (139aa)
iscU; iron-sulfur cluster assembly protein IscU; K04488 nitrogen fixation protein NifU and related proteins id=14625363 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
iscU; iron-sulfur cluster assembly protein IscU; K04488 nitrogen fixation protein NifU and related proteins Tax=CSP1_6_Rokubacteria
iscU; iron-sulfur cluster assembly protein IscU
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7911..9137)
DNA (1227bp) protein (409aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] id=14625362 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
iscS; cysteine desulfurase (EC:2.8.1.7)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9148..9582)
DNA (435bp) protein (145aa)
putative transcription factor IscR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative transcription factor IscR id=14625361 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative transcription factor IscR
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_28628_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9770..9928)
DNA (159bp) protein (53aa)
galactose-1-phosphate uridylyltransferase id=14625360 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
galactose-1-phosphate uridylyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 17 items

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