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RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1..372)
-----------------
DNA (372bp)
protein (124aa)
putative ring-cleavage extradiol dioxygenase id=14627127 bin=bin7_NC10_sister species=Haloterrigena thermotolerans genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
putative ring-cleavage extradiol dioxygenase Tax=CSP1_6_Rokubacteria
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(372..968)
-----------------
DNA (597bp)
protein (199aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] id=14627128 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
nicotinamidase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(952..2010)
-----------------
DNA (1059bp)
protein (353aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2135..2761)
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627130 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(2768..4441)
-----------------
DNA (1674bp)
protein (558aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) id=14627131 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) Tax=CSP1_6_Rokubacteria
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9)
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4547..5125
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627132 bin=bin7_NC10_sister species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5083..5772)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein id=14627133 bin=bin7_NC10_sister species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5769..6914)
-----------------
DNA (1146bp)
protein (382aa)
monogalactosyldiacylglycerol synthase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
monogalactosyldiacylglycerol synthase; K03429 1,2-diacylglycerol 3-glucosyltransferase [EC:2.4.1.157] id=14627134 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
monogalactosyldiacylglycerol synthase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6950..7387)
-----------------
DNA (438bp)
protein (146aa)
acyl dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acyl dehydratase id=14627135 bin=bin7_NC10_sister species=Thermus igniterrae genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
acyl dehydratase
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7393..7845)
-----------------
DNA (453bp)
protein (151aa)
MaoC-related acyl dehydratase id=14627136 bin=bin7_NC10_sister species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
MaoC-related acyl dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
maoC like domain protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8026..9120
-----------------
DNA (1095bp)
protein (365aa)
dctP; TRAP dicarboxylate transporter-DctP subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
C4-dicarboxylate transporter, substrate-binding protein id=4741736 bin=GWC2_Methylomirabilis_70_16 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dctP; TRAP dicarboxylate transporter-DctP subunit
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9196..10521)
-----------------
DNA (1326bp)
protein (442aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WK78_DESPC
TRAP dicarboxylate transporter, DctM subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TRAP dicarboxylate transporter, DctM subunit
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10518..11042)
-----------------
DNA (525bp)
protein (175aa)
tripartite AtP-independent periplasmic transporter subunit DctQ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DctQ5: TRAP dicarboxylate transporter, presursor id=2413350 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tripartite AtP-independent periplasmic transporter subunit DctQ
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11044..12096)
-----------------
DNA (1053bp)
protein (351aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Methionine synthase II (Cobalamin-independent) id=2413349 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Methionine synthase vitamin-B12 independent
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12178..13308
-----------------
DNA (1131bp)
protein (377aa)
menaquinone biosynthesis protein, family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative menaquinone biosynthesis protein, family id=2837809 bin=GWC2_Methylomirabilis_70_24 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
menaquinone biosynthesis protein, family
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13346..13987
-----------------
DNA (642bp)
protein (214aa)
hypothetical protein; K07081 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Futalosine synthase, putative id=4219940 bin=GWC2_Methylomirabilis_70_24 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
protein of unknown function DUF178
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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13981..15144
-----------------
DNA (1164bp)
protein (388aa)
Putative uncharacterized protein id=4781406 bin=GWC2_Methylomirabilis_70_16 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15119..15946)
-----------------
DNA (828bp)
protein (276aa)
hypothetical protein; K07083 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Hypothetical conserved protein id=4537022 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic solute-binding protein
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15958..16548
-----------------
DNA (591bp)
protein (197aa)
TetR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
TetR family transcriptional regulator id=14632638 bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
TetR family transcriptional regulator
RIFCSPLOWO2_12_FULL_NC10_sister_69_21_rifcsplowo2_12_scaffold_30472_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16538..16630)
-----------------
DNA (93bp)
protein (31aa)
mandelate racemase / L-alanine-DL-glutamate epimerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 20 items

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